Gene Ksed_10410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_10410 
Symbol 
ID8372550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1064105 
End bp1065217 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content67% 
IMG OID644991322 
Productpeptide chain release factor 2 
Protein accessionYP_003148851 
Protein GI256824891 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.232549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGTCG ACTATGTGCA AGAGATCCGT GAGCTCCGCA CGACCATGGA GTCGGTGAGG 
GAGGTCATCG ACCTGCCCCG CCTGAAGGAG CAGCTGGCGG ACCTGGAGCA GCAGTCCAGC
GCACCCGACC TGTGGGACGA CCCGGAGAAC GGACAGAAGG TCTCCGCGGC CATGTCCCGT
GTCCGTGGTG AGGTGGAGCG GATCGAGTCC ATGGATTCCC GCATCGACGA CCTCGAGGTG
TTGGTCGAGA TGGGCACCGA GGAGGGCGAC GCGGAGACCC TTGCGGAGGC CACCAAGGAG
CTGGCCGCCA TCCAGGCCGC GGTGGAGAAG CTCGAGGTGC GCACGCTGCT TTCGGGGGAG
TACGACGAGC GCGAGGCCGT GATCACCATC CGCGCCGGCG CCGGTGGTGT CGATGCCGCG
GACTTCGCCG AAATGCTCAT GCGCATGTAC CTGCGCTGGG CTGAGCGTCA CGAGTACCCG
ACCAAGGTGC TGGACACCTC CTACGCGGAG GAGGCGGGGC TGAAGTCGGT CACCTTCGAG
GTGAACGTGC CCTACGCCTA CGGCAACCTG GTGGTCGAGG GCGGAACGCA CCGCCTGGTG
CGCATCTCGC CGTACGACAA CCAGGGGCGG CGCCAGACCT CCTTCGCGGC GGTGGAGGTG
GTGCCGGTCA TCGAGCAGAC CGACTCCATC GAGATCCCGG AGAACGAGAT CAAGGTGGAC
GTGTTCCGCT CCTCGGGCCC CGGTGGCCAG TCGGTGAACA CCACCGACTC CGCCGTGCGC
ATGACGCACA TCCCCACCGG CATCGTGGTC TCGATGCAGA ACGAGAAGTC GCAGATCCAG
AACCGGGCCG CGGCGCTGCG CGTGCTCCAG TCGCGCCTGC TGCTGCAGCG CAAGGCCGAG
GAGGCCGCCG AGCGCAAGGA GCTGGCCGGC GACATCAAGG CCAGCTGGGG CGACCAGATG
CGCTCGTACG TGCTGCACCC GTACCAGATG GTCAAGGACC TGCGCACCGA GCACGAGGTG
GGCAACACCC AGTCGGTCTT CGACGGTGAC ATCGACGGCT TCATCGAGGC CGGCATCCGC
TGGAAGCGCG GCCAGGAGAA GCAGGCCGAC TGA
 
Protein sequence
MAVDYVQEIR ELRTTMESVR EVIDLPRLKE QLADLEQQSS APDLWDDPEN GQKVSAAMSR 
VRGEVERIES MDSRIDDLEV LVEMGTEEGD AETLAEATKE LAAIQAAVEK LEVRTLLSGE
YDEREAVITI RAGAGGVDAA DFAEMLMRMY LRWAERHEYP TKVLDTSYAE EAGLKSVTFE
VNVPYAYGNL VVEGGTHRLV RISPYDNQGR RQTSFAAVEV VPVIEQTDSI EIPENEIKVD
VFRSSGPGGQ SVNTTDSAVR MTHIPTGIVV SMQNEKSQIQ NRAAALRVLQ SRLLLQRKAE
EAAERKELAG DIKASWGDQM RSYVLHPYQM VKDLRTEHEV GNTQSVFDGD IDGFIEAGIR
WKRGQEKQAD