Gene Ksed_09930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_09930 
Symbol 
ID8372502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1024202 
End bp1024984 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content73% 
IMG OID644991274 
Productmetal-dependent hydrolase, beta-lactamase superfamily III 
Protein accessionYP_003148804 
Protein GI256824844 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value0.65106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.185671 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCTGTT CGGGCTCCTT CTCCGGTCCC CGCTCTGCCA CCTCCTGCTA CCTCGTGGAG 
CACGAGGCGC AGGGGCGCAC GTGGCGGGTG GTGCTCGACC TGGGCAGCGG GGCCCTCGGC
GAACTGCAGC GCTACACCGA CCCGACGGCG GTGGACGCCT ACCTCATCAG CCACCTGCAC
CCCGACCACC TGGTGGACCT GTGCGGGCTG TACGTGCTGC ACACCTACGA CCCGCACGCC
GCGCACCCGG ACCGCATCGC CGTGCACGGC CCGGCGGCGC TGCGCGAGCA CATGGACGGC
GTGTACGGCG TCCACCCCGG CGAGAGCCTG ACCTCCACCT ATAACTACCA CCCGGTGCGC
GACGGGTGGC AGACCACCAT CGGGCCGTTC ACCATCACGT GGTTCCAGGT CAACCACCCG
GGGGACGCCT ACGGCATGCG TGTGAGCGCG GGGGGCAACG TGCTGGCGTT CACCGGGGAC
ACCGACGACA CCCCCGCGCT GGACGGGTTG CTGATCGGCG CGGACGTGGT GCTGGCGGAC
TCGGCCTTCG TGGAGGGGCG GGACGCCGCC CAGGGCATCC ACCTGACGGG TCGCCGGGCC
GCCCTGGCCG CCCAGCGTGC CGGGGGAGTG GGACAGTTGG TGCTCACGCA CATCCCGCCG
TGGAACGACC CCGAGTACAC CCTCGCCGAG GCGCGGCAGG TGTGGGACGG CCCGCTGTGC
CTGGCCGAGC CGGGGCTGCT GCTGGAGGTC GCCCCGGTGG ACCACGCCCT CTCCGCCCGT
TGA
 
Protein sequence
MGCSGSFSGP RSATSCYLVE HEAQGRTWRV VLDLGSGALG ELQRYTDPTA VDAYLISHLH 
PDHLVDLCGL YVLHTYDPHA AHPDRIAVHG PAALREHMDG VYGVHPGESL TSTYNYHPVR
DGWQTTIGPF TITWFQVNHP GDAYGMRVSA GGNVLAFTGD TDDTPALDGL LIGADVVLAD
SAFVEGRDAA QGIHLTGRRA ALAAQRAGGV GQLVLTHIPP WNDPEYTLAE ARQVWDGPLC
LAEPGLLLEV APVDHALSAR