| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_09780 |
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| Symbol | |
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| ID | 8372487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | + |
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| Start bp | 1009346 |
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| End bp | 1011658 |
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| Gene Length | 2313 bp |
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| Protein Length | 770 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644991259 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_003148789 |
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| Protein GI | 256824829 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.0919066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0297571 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTCCGC AGAGCACCGA GCCCAGCCCC TCGCCGGAGA ACACCCCCGA CGTGCCCGCC
GCCCCCGACA GCCCGGACGC GGCACAGAAC ACCCCTGACG TGCCCGATGA GGGCGTCCGT
CACCAGTGGG ACGACCTCGC CCGCCGGGTG CGGGAGCACC GCTTCGCCTA CTACCTGGGC
CGCCCGACGA TCAGCGACGC CGACTTCGAC GCCCTGTTCC GCGAGCTCGA GCAGCTCGAG
TCCGAGCACC CCGGCCTGCG CACCCCGGAG AGCCCCACCC AGGAGGTCGG GGCGCCGGTC
TTCGAGACGG GCTTCGATGC GGTGGACCAC GCCGAGCGAA TGCTCAGCCT CGACAACGTC
TTCTCCTCCG AGGAGCTGGC CGCCTGGTTC CAGCGCGCCC GGGACGCCGC CGGCACCACG
GATCTGCACT ACCTGTGTGA GCTGAAGATC GACGGCCTGG CCGTCAACCT CACCTACGAG
GACGGCGTGC TGGTGCGGGC CGCGACACGC GGTGACGGCC GCACCGGCGA GGACATCACG
CTGAACGTGC GCACCATCCA GGGCGTCCCC CATCGGCTGG AGCGTCCCGC GGACCTGGCG
GACGACGCCA CCGCCACGGT CGACGTCCCG CCGCTGGTGG AGGTGCGCGG GGAGGTCTTC
CTGCCCCTGG AGAAGTTCGC CGAGCTGAAC GCCCGCCAGG TGGAGGCCGG CAAGGCGGCC
TTCGCCAACC CGCGCAACGC GGCCGCGGGG TCGTTGCGGC AGAAGGACCC ACGGGTCACC
GCATCGCGTC CGCTGCGGAT GATCGTCCAC GGCATCGGGG CCCGCGAGGG CTTCGACATC
GCCCGCCAGA GCGAGGCCTA CGAGGTGCTC GCCGGGTGGG GGTTGCCGGT CACCTCCCAC
GCCAAGGTGC TGGACACCCT CGAGGAGATC GAGCAGTACG TGGCGTACTG GGGCGGCCAC
CGGGAGGGTG CCGAGCACGA GCTGGACGGC ATCGTCATCA AGATCGATGA GGTGACGGTC
CAGCGCCAGC TCGGCTCCAC CTCGCGCGCA CCGCGGTGGG CGATCGCCTG GAAGTACCCG
CCCCAGGAGG TCACCACGAA GCTGCTGGAC ATCGCGGTCA ACGTGGGGCG CACCGGTCGT
GTCACGCCCT TCGGCGTCAT GGAGCCGGTG ACGGTCGCGG GGTCCACCGT CTCGATGGCC
ACCCTCCACA ACGCTCACGA GGTGCAGCGC AAGGGCGTAC TGATCGGCGA CACGGTCGTG
CTCCGCAAGG CCGGCGACGT CATCCCCGAG ATCCTCGGGC CGGTGGCCGA CCTGCGCGAC
GGCAGCGAGA CCGCGTTCGT CATGCCCACC CACTGCCCCT CCTGCGGGAC CGAGCTCGCC
CCGGCGAAGG AGGGCGACAA GGACATCCGC TGCCCCAACA GCCGGTCGTG CCCCTCGCAG
CTGCGCGAGC GGCTCTTCGG GCTGGCCGGG CGCGGGGCCT TCGACATCGA GTCCCTCGGG
TGGGAGGGCG CCGGCGCGCT GCTCGATGCG GGCGTGCTCA CCGACGAGGC GGGCGTCTTC
GACCTCACCG CCGAGGACCT GTTGCGGACC AGCCTGTACA CGCGGGCGGC CAAGAAGGCA
GAGGCCGCGG CCGCCGAGGA GGGCGACCCC GAGGGCGTCC TCCCACCCGG GGGAGTGGTC
GACGGCCGGG TGCTGTCGGC GGTCGGTGTG CGCCTGCTCG ACAACCTGCA GCAGGTCAAG
GAGCAGCCCT TGTGGCGGGT GCTGGTTGCC CTGTCGATCC GGCACGTCGG CCCCACCGCA
GCGCGGGCCC TGGCGGGGCA CTTCGCCACC ATGGAGGCCA TCCGCGCCGC CTCCACCGAG
GAGTTGGCGG CCGTGGAGGG CGTCGGCCCT ACCATCGCCG AGGCCGTGAC CGAGTGGTTC
GGCGGTGAGG GCAACGGCTG GCACCGGCAG ATCGTGGACA CCTGGGCGGC GGCGGGCGTC
CGCATGGCCG ACGAGCGCGA CGAGTCCATC GAACGCACCC TCGAGGGGCT CACGGTCGTC
GTGACCGGGT CGCTCGAGGG GTGGTCGCGA GACGAGTCCA AGGAGGCCAT CCTGACCCGG
GGCGGCAAGG CCAGCGGGTC GGTGTCGAAG AAGACCGACT ACGTGGTCGT CGGCGCCAAC
GCCGGGTCGA AGGCCACGAA GGCCGAGGAG CTCGGGCTGC CCATCCTCAG CGAGGAGCAG
TTCGGCGAGC TGCTGGCCAC CGGGCGCGTC GAGGGTGTGA CGCCCGAGGA CGACGCGGGG
ACTGACGCGG AAGAGCCCGC CGAGAAGGCC TGA
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| Protein sequence | MSPQSTEPSP SPENTPDVPA APDSPDAAQN TPDVPDEGVR HQWDDLARRV REHRFAYYLG
RPTISDADFD ALFRELEQLE SEHPGLRTPE SPTQEVGAPV FETGFDAVDH AERMLSLDNV
FSSEELAAWF QRARDAAGTT DLHYLCELKI DGLAVNLTYE DGVLVRAATR GDGRTGEDIT
LNVRTIQGVP HRLERPADLA DDATATVDVP PLVEVRGEVF LPLEKFAELN ARQVEAGKAA
FANPRNAAAG SLRQKDPRVT ASRPLRMIVH GIGAREGFDI ARQSEAYEVL AGWGLPVTSH
AKVLDTLEEI EQYVAYWGGH REGAEHELDG IVIKIDEVTV QRQLGSTSRA PRWAIAWKYP
PQEVTTKLLD IAVNVGRTGR VTPFGVMEPV TVAGSTVSMA TLHNAHEVQR KGVLIGDTVV
LRKAGDVIPE ILGPVADLRD GSETAFVMPT HCPSCGTELA PAKEGDKDIR CPNSRSCPSQ
LRERLFGLAG RGAFDIESLG WEGAGALLDA GVLTDEAGVF DLTAEDLLRT SLYTRAAKKA
EAAAAEEGDP EGVLPPGGVV DGRVLSAVGV RLLDNLQQVK EQPLWRVLVA LSIRHVGPTA
ARALAGHFAT MEAIRAASTE ELAAVEGVGP TIAEAVTEWF GGEGNGWHRQ IVDTWAAAGV
RMADERDESI ERTLEGLTVV VTGSLEGWSR DESKEAILTR GGKASGSVSK KTDYVVVGAN
AGSKATKAEE LGLPILSEEQ FGELLATGRV EGVTPEDDAG TDAEEPAEKA
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