| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_09570 |
|---|
| Symbol | |
|---|
| ID | 8372466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 985143 |
|---|
| End bp | 987341 |
|---|
| Gene Length | 2199 bp |
|---|
| Protein Length | 732 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644991238 |
|---|
| Product | glycogen debranching enzyme GlgX |
|---|
| Protein accession | YP_003148768 |
|---|
| Protein GI | 256824808 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
|---|
| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.213931 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.108769 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCTGC ACCACGGCTT CTCGCCGGAC ATCCCGCCCC ACCCCGGACT GCGCAGCATC
CCCGACGGCG CGGGTGACGA CCCAGCGGCC CGGGACGTGG TGGAGGTCGC CGTGGTCGCC
AAGGAGGCCA CGGCCGTGTG GCTCTGCCTG CGCGAGGACG ATGGGGCCGA GCGCCGCGTC
CCGCTGCGCC ACCAGGTGCA CGGCATCTGG TTCGACCAGG TGGCCGACGT CCCGCCGGGA
ACCCCGTACT GCTTCCGGGC CGACGGCCCG TGGGAGCCCA CGCGCGGTCT GCGCCACAAC
CCGGCCAAGC GCCTGCTCGA CCCCTTCGGC GTGGTCGTCA CCGGCACCGT CACCCCCGGC
CCGGAGCTCT TCGCCCACCA GGTGGACAAG CACCTGCAGG CGGTCGACGG CGGGGCCCAC
CGCAGCGAGG TCGACAGCGG CGATGCGGTG CCCTGGAACC TGGTGCCCGA CGACCGGGCG
CTGGGCCACA CCTTCGACTG GGGCGACGAC GCGCCCCCGT TCACCCCGTG GCGCGACACC
GTCATCAGCG AGGGCCACGT CCACGGCCTC ACGGCCACCC ACCCCGAGGT GCCCGAGGAG
CTCCGGGGCA CCTACGCCGG ACTGGCACAC CCTGCCGTCA TCGAGCACCT GGTCGCACTC
GGGGTCACGG CCGTCGAGCT GCTGCCGCTC CACGCCAAGG CCGACGAGCT GCACCTGATG
GCCCGGGGGG CTGAGAACTA CTGGGGATAC AACTCCCTGT CCTGGTTCGC GCCCCACCCG
GGGTACGCCG CCACCGACGA CCCGATGGGG GTCGCCGACG AGGTGCGCAG CATGGTCAAG
GCCCTCCACA CCGCCGGGCT GGAGGTGATC CTGGACGTCG TCTACAACCA CACCGCCGAG
GAGTCCAGCG CCTGGGGCCC GACCTACTCG TGGCGGGGTC TGGACGCCCC GCTGTACTAC
CGGCTGGACG ACGTGGGCCG GGACGTCGAC CACACCGGCT GTCACAACAC CGTGGACACC
ACGCGGCCCG AGACCCTCCG CCTGGTGCTG GACTCGCTGC GCCACTGGGT GACCTCCTAC
CACGTGGACG GCTTCCGGTT CGACCTCGCC TCGGCGCTGG GGCGCGACGT CTCCGGCACC
TGGACCCGCA ACCACCCGTT GCTGCTGGCG CTGCGCACCG ACCCCGTCCT CTCCCGCGTG
AAGCTGGTGG CCGAGCCGTG GGACGTCTCC CCCGGCGGCT GGCAGACCGG TTCCCACCCG
CCGCCCATGG CCGAGTGGAA CGACCGCTTC CGCGATGCCG TCCGGGGCTT CTGGCTGACC
GGCGGGACGA GTGTCAGTGA GCTGGCCACC CGCCTGTCGG GCTCCTCCGA CCTGTTCGAC
CACCACGGCC GGCTGCCCAC GAGCTCGGTG AACTTCGTGA CCGCCCACGA CGGCTTCACG
CTGCACGACC TCACCGCCTA CGACCACAAG CACAACATCG ACAACGGTGA GGACAACCAG
GACGGCGCGG GCGCCAACCA CTCGGCGAAC CACGGCACCG AGGGGCCGGT GCCGGACACG
CCGGCCGGCG CCCGCATCGC CGCGGCCCGG CGACGGACCA TGCGCAACCT GTTGGCCACC
ACCCTGCTGG CCACGGGGAC GCCGATGCTG ACCGCCGGCG ACGAGTTCGG ACGCACCCAG
GGCGGCAACA ACAACCTGTA CACGCTCACC GACGCCACCC GTCACCTGGC CGCGCTGGAC
TGGGAGTGGG AGCAGTGGCA GGCCGACCTG GTGGCGACCA CGCGGCGGCT GGTGGAGCTA
CGGCGCCGCT TCCACGCCAT CGGGGACCAC GCCTTCTTCG CGCCCTTCAC CCCCGGCGAC
GGCTCGACGG ACCCCGGCGG CGGCCTGCGC GCGGGCTGGT TCACCGCAAC GGGTGCTCCC
CTGACCGGCA CCGACTGGGC CGACGCCTCG ACCCGCACCC TGCAGATGGT GTTGATCGGC
GAGGACGGTC CCGCCTCCGA GGCGGTCGTC GTCGCCCTGC ACGCCGGGGG CCCGGGCGAG
CTGGTCGTCC CGGTCGTCGA CGGGTGGCCC ACCGCCCATC GGGAGTGGAG CTCGGCCTGG
GAGCACCCCG ACCACCCCGA TGACGACGCC GACCCGCAGC CGGGCGAGGC CCTGGCCCTG
GACGGGCCCA CCGTCATCGT GTGGAGTCTG CACCCCTGA
|
|---|
| Protein sequence | MPLHHGFSPD IPPHPGLRSI PDGAGDDPAA RDVVEVAVVA KEATAVWLCL REDDGAERRV
PLRHQVHGIW FDQVADVPPG TPYCFRADGP WEPTRGLRHN PAKRLLDPFG VVVTGTVTPG
PELFAHQVDK HLQAVDGGAH RSEVDSGDAV PWNLVPDDRA LGHTFDWGDD APPFTPWRDT
VISEGHVHGL TATHPEVPEE LRGTYAGLAH PAVIEHLVAL GVTAVELLPL HAKADELHLM
ARGAENYWGY NSLSWFAPHP GYAATDDPMG VADEVRSMVK ALHTAGLEVI LDVVYNHTAE
ESSAWGPTYS WRGLDAPLYY RLDDVGRDVD HTGCHNTVDT TRPETLRLVL DSLRHWVTSY
HVDGFRFDLA SALGRDVSGT WTRNHPLLLA LRTDPVLSRV KLVAEPWDVS PGGWQTGSHP
PPMAEWNDRF RDAVRGFWLT GGTSVSELAT RLSGSSDLFD HHGRLPTSSV NFVTAHDGFT
LHDLTAYDHK HNIDNGEDNQ DGAGANHSAN HGTEGPVPDT PAGARIAAAR RRTMRNLLAT
TLLATGTPML TAGDEFGRTQ GGNNNLYTLT DATRHLAALD WEWEQWQADL VATTRRLVEL
RRRFHAIGDH AFFAPFTPGD GSTDPGGGLR AGWFTATGAP LTGTDWADAS TRTLQMVLIG
EDGPASEAVV VALHAGGPGE LVVPVVDGWP TAHREWSSAW EHPDHPDDDA DPQPGEALAL
DGPTVIVWSL HP
|
|---|
| |