Gene Ksed_09500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_09500 
Symbol 
ID8372459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp973432 
End bp974472 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content72% 
IMG OID644991231 
Productthioredoxin domain-containing protein 
Protein accessionYP_003148761 
Protein GI256824801 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.460116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.88242 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAACC AGCCCTTCTC CCGCGCCAGC CTCCACGGCG CCGTTGACCT CAGCGGCATG 
AAGCAGCAGC AGATGCAGGC CGCCATGTCC GGTGGGCAGC AGCCCGGCGC CGGCGCCCCA
CAGCAGGGTG GGACCGCCGG CCAGCCGGCT CCCGCTGGCG GCGACCCGCG GTCCACCGTG
GTGGCCGTGG ACCTCGACAG CTTCGGGGAG GTGCTGCAGG ACTCCGCGGT GGTGCCCGCC
GTGCTCGTGC TGTGGAGCCC GCAGATCCCC GGCGCGCTGG AGTACGTCCA GATGATGGAG
CGGCTTGCCA TCGAGTTCGA GGGCCGCTTC CGCCTCGCCA CGGGCAACGT GGTCGCCCAG
CCCGAGATGC TGCAGGCCTT CCAGATCCCC GAGCTGCCCG AGGCCATGAC CATCGCGGTG
ATGATGGGCC AGCCGATGCC GCTGTACGCC GGGGTCCAGC CGGAGGAGGA GGTTCGGGCG
GTCATGCAGA ACCTCCTGCA GGCCGCCGCG CAGAACGGGG TCACCGGCCG TGCTCAGCCG
GGCGTCTCCG GATCGGTGTC CGAGGCCGGC ACGCAGGGCG AGCAGCCTGG TGGGCAGGAG
CAGCCCGAGC AGCCGGTCGA GGAGCCGCTG TCACCCCACG TGCAGGCGGC CTACGACGCC
ATCGATGCGG GGGACTTCGC CGCCGCGGTG GCCGCGTTCG ACGCTCGCCT GGCCGAGGAG
CCGGGTGACG AGGAGGCGCG TCTGGGGCGG CAGCAGGTGG TGCTGCTGGA ACGGGCCGGG
TCGCTGGACG CCACGGCCGT CCGCGAGGCG GCCGCCAAGG ACGCCACCGA CATCGAGGCG
CAGATGCAGG CCGCCGATCT CGACCTCATG GGGGGTCACG TGGAGGACGC CTTCGCCCGC
CTCATCGACA CCGTGAAGGT CACCACGGAC GAGGATCGCG ATGCCGTGCG CGAGCGGTTG
CTCGAGCTGT TCGAGATGGT GGGGTCGAGC GACCCGCGCG TGCGCACGGC GCGCAGCCAG
CTCATGAGCG CGCTGTTCTG A
 
Protein sequence
MSNQPFSRAS LHGAVDLSGM KQQQMQAAMS GGQQPGAGAP QQGGTAGQPA PAGGDPRSTV 
VAVDLDSFGE VLQDSAVVPA VLVLWSPQIP GALEYVQMME RLAIEFEGRF RLATGNVVAQ
PEMLQAFQIP ELPEAMTIAV MMGQPMPLYA GVQPEEEVRA VMQNLLQAAA QNGVTGRAQP
GVSGSVSEAG TQGEQPGGQE QPEQPVEEPL SPHVQAAYDA IDAGDFAAAV AAFDARLAEE
PGDEEARLGR QQVVLLERAG SLDATAVREA AAKDATDIEA QMQAADLDLM GGHVEDAFAR
LIDTVKVTTD EDRDAVRERL LELFEMVGSS DPRVRTARSQ LMSALF