| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_09010 |
|---|
| Symbol | |
|---|
| ID | 8372410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 919767 |
|---|
| End bp | 920663 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644991182 |
|---|
| Product | small-conductance mechanosensitive channel |
|---|
| Protein accession | YP_003148714 |
|---|
| Protein GI | 256824754 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0668] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.0427247 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0153093 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACCACC CTGCGGCACC CGCGGAGATC ACCCGCGAGG CCCTCTGGGA GGCGGTGGCC
TCGTGGCTCG GAACGCACGG CCTGGCCATC GTCGCGATCG TGGTGGCCGC GCTGGCGCTG
CGCGCGCTGG CGCGCCACCT CATCCGGCGG CTCACCACGT GGATGACCGA CCACGCCCAC
GAGTCCACGC AGGACGGCCG CCGGGCGGAC CTCCGTCGCC GGCAGCGGGT GCTGACCCTG
ACCAGCCTGC TGCGCAGCAC CTCCTCGGTG GTGATCTGGA CCGTCGCAGC ACTGATGGTG
TGCGACCAGC TGGGGCTTCC CCTGGCGCCG CTGCTGGCCA GCGCCGGGAT CGGTGGCCTG
GCCATCGGTT TCGGCGCCCA GTCGCTGGTG AAGGACGTCA TCAGCGGCGT GATGCTGATG
ATCGAGGACC AGTTCGGTGT GGGTGACTGG GTGGACCTCG GCGAGGCCAG CGGCGAGGTG
GAGGAGGTCA CCCTGCGGGT CACCCGCCTG CGCTCGGCCG ACGGCGTGGT CTGGTACATC
CGCAACGGCG AGATCCTTCG CGTGGGCAAC ACCTCCCAGG GCACCCCGGT GGCCACGATC
GACGTGCAGG TGGCCGCCCG CGCCGACTCG CGCACCGTGG TGGAGGTGCT CACCGGCGCG
ATGGAGGAGC TGGCTGCCTC CCCCGAGGGC GAACGGCAGC TGCTGGGGGT GCCCTCGGTC
GCCGGCATCC AGGAGGTGCG CAACGGTGCC ATGACGGTGC GGATCTTCGC CGACTGCGTC
CCCAGCGAGC AGTACGCGGC GGCCCGGGTG ATCCGGGCCG AGGCCAAGCG CGCCCTGGAC
GCCGCGGGAG TTCCCGGACC GCCGGTGCGA GACTGGGGCC ATGACCAGCC CAGCTGA
|
|---|
| Protein sequence | MNHPAAPAEI TREALWEAVA SWLGTHGLAI VAIVVAALAL RALARHLIRR LTTWMTDHAH
ESTQDGRRAD LRRRQRVLTL TSLLRSTSSV VIWTVAALMV CDQLGLPLAP LLASAGIGGL
AIGFGAQSLV KDVISGVMLM IEDQFGVGDW VDLGEASGEV EEVTLRVTRL RSADGVVWYI
RNGEILRVGN TSQGTPVATI DVQVAARADS RTVVEVLTGA MEELAASPEG ERQLLGVPSV
AGIQEVRNGA MTVRIFADCV PSEQYAAARV IRAEAKRALD AAGVPGPPVR DWGHDQPS
|
|---|
| |