| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_08940 |
|---|
| Symbol | |
|---|
| ID | 8372403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 913066 |
|---|
| End bp | 914037 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644991176 |
|---|
| Product | acyl-CoA thioesterase |
|---|
| Protein accession | YP_003148708 |
|---|
| Protein GI | 256824748 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1946] Acyl-CoA thioesterase |
|---|
| TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 0.271356 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0733048 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCCCAG AGAACAGTTC CCCCACCGGT TCGCACGACC CCTCCGGCCT GCAGGCCGAG
ACCCCGGACA TGGGCTCCGG CATGCACGGC CGCGCCCCCA TCGAGCTTCC GGCGGACCCC
TTCGCGCAGC TGCTGGAGGT GCTCGACATC CGGGCCCTGG GCGCGAACAC CTTCATCGGG
CAGAGCCAGC CGCAGCCGCA CGGGCGGGCC TTCGGCGGGC AGGTGCTGGC CCAGTGCGTG
ATGGCCGCGG GCCGCACGCT GGTGGCCCTG GACGACGACG GGGACCGGTA CATCCACTCC
CTGCACGGCT ACTTCCTGCG CCCGGCGGAC TCCTCGCGGG AGATCCGCTT CGAGGTGGAG
CGCCTGCGTG ACGGGCGCTC CTTCTCCGCC CGCCGGGTGC ACGCCTACCA GGACGACAAG
GTGCTGCTCT CGATGACCAC CTCCTTCCAG GAGCCGGCCG GCGGGCTGGA CCACCAGGAG
CGGATGCCGG ACGTGCCGGC ACCGGAGGAG CTGCCCAGCA TCTCCGAGCT GCTGGCCGGG
GTGGACGACC CGCGGGCGAT CTTCCTGACC AAGGGCCGCC CGGTGGACAT GCGCTGGGTG
GACGCGCCGC TGTACGGCAA CAACTTCGCC CGCACCGACC GGCAGAGCGT GTGGGTGCGC
TTCACCGGGC AGCTGCCCGA GGACCCGCTG CTGAACGCCG CGGCCAGCTG CTACCTCTCG
GACTACACGC TGCTGGAGCC CGTGCTGCGC CGCCACGGCA TCCCGTGGAC CGACACCCGG
CTGCGCCCCG CGAGCCTCGA CCACGCGATG TGGTTCCACC GCCGCCCGCG CCTGGACGAC
TGGATGCTGT ACACGCAGTC CTCCCCCTCC GCACAGTCCG GCCGTGGGCT CGGCGTGGGC
CGGCTGTTCC ACGCCGACGG CACCCTCATG GCCTCGGTCG CCCAGGAGGG CATGGTCCGC
ATCAAGGAGT GA
|
|---|
| Protein sequence | MTPENSSPTG SHDPSGLQAE TPDMGSGMHG RAPIELPADP FAQLLEVLDI RALGANTFIG
QSQPQPHGRA FGGQVLAQCV MAAGRTLVAL DDDGDRYIHS LHGYFLRPAD SSREIRFEVE
RLRDGRSFSA RRVHAYQDDK VLLSMTTSFQ EPAGGLDHQE RMPDVPAPEE LPSISELLAG
VDDPRAIFLT KGRPVDMRWV DAPLYGNNFA RTDRQSVWVR FTGQLPEDPL LNAAASCYLS
DYTLLEPVLR RHGIPWTDTR LRPASLDHAM WFHRRPRLDD WMLYTQSSPS AQSGRGLGVG
RLFHADGTLM ASVAQEGMVR IKE
|
|---|
| |