| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_08910 |
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| Symbol | |
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| ID | 8372400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | + |
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| Start bp | 910319 |
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| End bp | 911269 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644991173 |
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| Product | 23S RNA-specific pseudouridylate synthase |
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| Protein accession | YP_003148705 |
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| Protein GI | 256824745 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 0.267328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.027473 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCGTCG CCCGTGTGCG CATCCCGCCG GGCGGGGACT GGACCACGGT GGCCGAGGCG
CTCGCGGAGG TGACCGGGCA GCCAGAGCTC GTCCGTGCCG GCGTCGAGGC CGGGGAGGTG
GTCGTGGACG ACGGGGTACC CGGCTCCCGC GGGCTCGTCG TCGACGCGAC CACCGAGTAC
CTGCCCACGG GGCCTCGCCG CCGCGTGGCG TGGCTCTACC GGCCGTACCC GACCGAGCCC
GAGGTGCCTG GCGGGCTGCC GGTTCTCCAG GCTGACGAGC ACTGCGTGGT GGTCGACAAG
CCGCCCTTCC TGGCGACCAT CCCGCGCGGG GTGCACGTGC AGCAGACGGT GGTCGCACGC
GTGCGCGAGG ACTTCCCCGA GGCCGTGCCG GTGCACCGGC TCGACCGGCT CACCTCCGGC
GTGCTGCTGT GCGCCCGCAC CCCGGAGGCC CGGCGTCCCC TGCAGCAGCT CTTCGAGAAG
CGTCAGGTGG CCAAGACCTA CGAGGCGCTG GTGTCGCTGC CTCCCGAGGA GGCGGCCGGC
GCCTTCTCGG TGTCACCAGG AGTGGAGGGC CTGGGGCTGG CGGAGCGCGT GGAGCGGGCG
ATCGGCGAGC AGGAGCACCA CCTGGTGAAG AAGCGCGGGA GCCAGCAGGT GGTCGTGGTG
CCCGGGCCGC CGAACGCGCT CACCCGCATC GAGGTGGTGG AAGTCGACGA GGCCACCGGG
CGGGCGCGGC TGCGGTTGTT CCCGCACACC GGGCGTACCC ACCAGCTGCG GGTGCAGCTG
GCGCACCTGG GGCTGCCGAT CGTCGGGGAC CCGCTCTATC CCGTGCAGAC CGAGCAGGTG
ACGGGGGACT TCTCCACGCC GCTGCAGCTG CTGGCGACCC GGCTGGAGTG GACCGACCCG
TGGACGGGGA AGGCCCGGCG GGCGGAGTCG CGCTCTCCTC TGCTTGGCTG A
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| Protein sequence | MGVARVRIPP GGDWTTVAEA LAEVTGQPEL VRAGVEAGEV VVDDGVPGSR GLVVDATTEY
LPTGPRRRVA WLYRPYPTEP EVPGGLPVLQ ADEHCVVVDK PPFLATIPRG VHVQQTVVAR
VREDFPEAVP VHRLDRLTSG VLLCARTPEA RRPLQQLFEK RQVAKTYEAL VSLPPEEAAG
AFSVSPGVEG LGLAERVERA IGEQEHHLVK KRGSQQVVVV PGPPNALTRI EVVEVDEATG
RARLRLFPHT GRTHQLRVQL AHLGLPIVGD PLYPVQTEQV TGDFSTPLQL LATRLEWTDP
WTGKARRAES RSPLLG
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