Gene Ksed_08890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_08890 
Symbol 
ID8372398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp907975 
End bp908511 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content72% 
IMG OID644991171 
Productsingle stranded DNA-binding protein 
Protein accessionYP_003148703 
Protein GI256824743 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.193976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA CCTACCTGAC CGTGACCGGC AACGTGGCGA CCCAGCCGAT CCTGCGCCAG 
GGGCGCAGCG GCACGGCCTT CCTGACCTTC CGGTTGGCGC AGAACATCAA CCGGGTGGAC
CGCTCCACCG GGGTGGTCGA CACCGTGGCC ACCAACTGGA TGACGGTGTG CGCCTTCCGC
AACCAGGCGG TGAACCTCTA CCGCTCGCTG ACCAAGGGGC AGCCGGTGAT CGTGCACGGC
CGGCTGCGGA TCCAGGACTG GTCCACCGAC GAGCGCAGCG GCACCACCGT GGAGCTCGAG
GCCACCGCCG TGGGGCACGA CCTCTCGCGG GGGCAGTCCT GCTTCGTGAA GGTCGCGAGC
CCGCCCATGC CGCAGGTCGG CGACGCCGAG GAGGAGCGCC AGCGCCTGCG TGCGGTGGCC
GCCGAGGCGG CGGTCACGGC AGCGGAGAGC TCGCTGCCGG TGTTCGTGGA GCCGGCCCCC
CAGGACCAGG AGGCGGGGGT GGCTCCCGAG CCCGAGCCCG AGGTGGTCTC CGCCTGA
 
Protein sequence
MSETYLTVTG NVATQPILRQ GRSGTAFLTF RLAQNINRVD RSTGVVDTVA TNWMTVCAFR 
NQAVNLYRSL TKGQPVIVHG RLRIQDWSTD ERSGTTVELE ATAVGHDLSR GQSCFVKVAS
PPMPQVGDAE EERQRLRAVA AEAAVTAAES SLPVFVEPAP QDQEAGVAPE PEPEVVSA