| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_08780 |
|---|
| Symbol | |
|---|
| ID | 8372387 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 898017 |
|---|
| End bp | 899459 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644991161 |
|---|
| Product | signal transduction histidine kinase |
|---|
| Protein accession | YP_003148696 |
|---|
| Protein GI | 256824736 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3920] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.102396 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0847778 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGGGACT GGCAGCTCCT CGCGGACCTG TCGATGGCGG ACCTGGTCCT CTGGGTCCGC
CAGCCCGCCG CCGTGGCCGG CGAGCCGGAC ACCTGGCTCG CCGTGGCGCA CGCCCGCCCC
ACCACCTCGC AGATGGTCTT CGTGGAGGAC GTGGTGGGGC GGGACAGCGA GGGCATGCAG
GGTCTGGCCT GGGCCGCCCG CACCGGGGGC CGTGTCCACC TGGGCGGCCG TCAGCTGAGC
GCCGGGCGGG TCGTGGACGA GGACGTGGTG GGGGTGCGCG CCTCCCACCA GAAGGACGAC
TGCGGGGCGG TGCTCAGCCG CCACACGCTG GCCTCGGTGA TGCGCAGCTC CTCGAGCCTG
GAGCAGCGCT ACCGCGCCAT GGCCGACGAC CTGATGACGA TGATCTCCCA GGGGGAGTTC
CCCACCCTCG CCGCGGCGAC GGGGCGCCGG CGGGGCGCCC CACGCGTGGG GGACGGGGTC
CTGCGCCTGG ACGCCTCCGG GGTGGTGCAG TACGCCAGCC CGAACGCCGT CTCCGCGCTG
CACCGGCTGG GCGTCTCGGG GGCCGTCCCC GGGCAGCGCC TGGTGGACAT GGTCTCGGAG
CTGCCGCGCA CCGCATCGGG CAGCCTCACG CCCGTGGACG AGGCGCTGCC GGTGGTGCTC
ACGGGGCGCG CCGCCTGGTG GTCGGAGATC GACACCGGGG CGGTGCAGGT GTCGGTGCGG
GCCATCCCGG TGGTCGTCGA CGGGCGCCGG GCCGGGGCTC TGGTGCTGAT GCGGGACGTC
ACCAGCCTGC GGCGGGGCGA GGAGGCACTC GTCTCACGTG AGGCCTCCGT GCGGGAGGTG
CACCACCGCG TCAAGAACAA CCTGCAGACC GTCAGCGCCC TGCTGCGCCT CCAGGCCCGG
CGGGTGGAGG ACCAGGCGGC GCGGGCCGCG CTGGAGACCG CGGTGCACCG TCTGGGCGCC
ATCAGTGTGG TGCACGAGAC CCTGGCGCAG ACGGCGGAGG AGGTCGTGGA CGTGGACCGC
GTCGTCGACC GGGTGGTGGG GCTGGTGGTG GACCTCACCG GCGCGGGGGA GGGGGAGGGG
GAGGGGGACC AGCGCATCAC CCACCGCCGC GAGGGCAGCT TCGGGGAGAT GGGCTCGGCC
CAGGCCTCAG CAGTCGCCAT GGTCGTGAGC GAGCTGGTGC AGAACGCGGT CACCCACGCC
GGGGACGGCA CGGTGGAGGT GGTGGTGGGG GCGCGTCGGA TGGCGCGGCC CGGCGAGGGG
GACCCGACGC TGACGGTGTC GATCAGCGAC GACGGGCCGG GCATCGACCC CGATGCGGGC
GCAGCCGGCA CCGGGCTGGG GCGGCAGATC GTGGAGGCCC TGGTCGGGGA TCTCGGGGGG
ACGGTCACCT GGGAGGCGAA CACGCCCCGG GGTACCCGGG CCACCTTCAC CGCCCGGGTG
TGA
|
|---|
| Protein sequence | MGDWQLLADL SMADLVLWVR QPAAVAGEPD TWLAVAHARP TTSQMVFVED VVGRDSEGMQ
GLAWAARTGG RVHLGGRQLS AGRVVDEDVV GVRASHQKDD CGAVLSRHTL ASVMRSSSSL
EQRYRAMADD LMTMISQGEF PTLAAATGRR RGAPRVGDGV LRLDASGVVQ YASPNAVSAL
HRLGVSGAVP GQRLVDMVSE LPRTASGSLT PVDEALPVVL TGRAAWWSEI DTGAVQVSVR
AIPVVVDGRR AGALVLMRDV TSLRRGEEAL VSREASVREV HHRVKNNLQT VSALLRLQAR
RVEDQAARAA LETAVHRLGA ISVVHETLAQ TAEEVVDVDR VVDRVVGLVV DLTGAGEGEG
EGDQRITHRR EGSFGEMGSA QASAVAMVVS ELVQNAVTHA GDGTVEVVVG ARRMARPGEG
DPTLTVSISD DGPGIDPDAG AAGTGLGRQI VEALVGDLGG TVTWEANTPR GTRATFTARV
|
|---|
| |