Gene Ksed_08710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_08710 
Symbol 
ID8372380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp887717 
End bp888376 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content77% 
IMG OID644991155 
ProductSAF domain-containing protein 
Protein accessionYP_003148690 
Protein GI256824730 
COG category 
COG ID 
TIGRFAM ID[TIGR03177] Flp pilus assembly protein CpaB 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.743101 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGACA GCCCGGTGGC ACAACGGCTG CGCAGGCCCC GGTGGACGGA CGCCCGCCTC 
CTGGTGGGCG GAGCCCTGGT GCTGGCGGCG ACCCTCGCGG GGGCCGCTCT GCTGGGGCAG
GACGAGGGCC CCCGGCACTG GGTCGCGGCG GCGGACCTCC CCACCGGCCA TGTGCTGGGC
AGCGAGGACC TGCGTCCGGT GGAGGGAAGC TCGCCCGAGG GGGTCTACCT CACCGGTGAC
GACCCCCTGG CCGACCGGGC CGGTCAGGTG GTCCTGCGCC CGGTCGGCCA GGGGGAGTTC
CTCCCCGTCG CGGACCTCGG CGGGGCAGAC CGGCTCGACC TGCGCCGGGT CTCGCTCGAG
GTGTCCCCCG GGAGCGCGGC CACGTTGAGC CCGGGCTCCG TGGTGGACCT GTGGGCCACG
CCGCGTGCCG TGGCGGGGGA GAAGAAGCGC CCGACACCTC GCCAGGTGCT GGCCGGGGCG
GAGGTGGCCC GCGTGCAGGA GGCCGGTGAC CGGCTCGCCG GGGGCGACCA GACGGTCGCG
GTCGACTTCC TGGTGTCCAC CGACCAGGTG GAGGAGCTCC TGGCCGAGAC CGGCTCCGAA
GCCGAGGTGA CGGCCGTCCC GTTGGCGGGC TCGCCGGGCA GCGCGGGGGC AGGGTCGTGA
 
Protein sequence
MPDSPVAQRL RRPRWTDARL LVGGALVLAA TLAGAALLGQ DEGPRHWVAA ADLPTGHVLG 
SEDLRPVEGS SPEGVYLTGD DPLADRAGQV VLRPVGQGEF LPVADLGGAD RLDLRRVSLE
VSPGSAATLS PGSVVDLWAT PRAVAGEKKR PTPRQVLAGA EVARVQEAGD RLAGGDQTVA
VDFLVSTDQV EELLAETGSE AEVTAVPLAG SPGSAGAGS