Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_08710 |
Symbol | |
ID | 8372380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 887717 |
End bp | 888376 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644991155 |
Product | SAF domain-containing protein |
Protein accession | YP_003148690 |
Protein GI | 256824730 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.743101 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGGACA GCCCGGTGGC ACAACGGCTG CGCAGGCCCC GGTGGACGGA CGCCCGCCTC CTGGTGGGCG GAGCCCTGGT GCTGGCGGCG ACCCTCGCGG GGGCCGCTCT GCTGGGGCAG GACGAGGGCC CCCGGCACTG GGTCGCGGCG GCGGACCTCC CCACCGGCCA TGTGCTGGGC AGCGAGGACC TGCGTCCGGT GGAGGGAAGC TCGCCCGAGG GGGTCTACCT CACCGGTGAC GACCCCCTGG CCGACCGGGC CGGTCAGGTG GTCCTGCGCC CGGTCGGCCA GGGGGAGTTC CTCCCCGTCG CGGACCTCGG CGGGGCAGAC CGGCTCGACC TGCGCCGGGT CTCGCTCGAG GTGTCCCCCG GGAGCGCGGC CACGTTGAGC CCGGGCTCCG TGGTGGACCT GTGGGCCACG CCGCGTGCCG TGGCGGGGGA GAAGAAGCGC CCGACACCTC GCCAGGTGCT GGCCGGGGCG GAGGTGGCCC GCGTGCAGGA GGCCGGTGAC CGGCTCGCCG GGGGCGACCA GACGGTCGCG GTCGACTTCC TGGTGTCCAC CGACCAGGTG GAGGAGCTCC TGGCCGAGAC CGGCTCCGAA GCCGAGGTGA CGGCCGTCCC GTTGGCGGGC TCGCCGGGCA GCGCGGGGGC AGGGTCGTGA
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Protein sequence | MPDSPVAQRL RRPRWTDARL LVGGALVLAA TLAGAALLGQ DEGPRHWVAA ADLPTGHVLG SEDLRPVEGS SPEGVYLTGD DPLADRAGQV VLRPVGQGEF LPVADLGGAD RLDLRRVSLE VSPGSAATLS PGSVVDLWAT PRAVAGEKKR PTPRQVLAGA EVARVQEAGD RLAGGDQTVA VDFLVSTDQV EELLAETGSE AEVTAVPLAG SPGSAGAGS
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