Gene Ksed_08400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_08400 
Symbol 
ID8372349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand- 
Start bp856096 
End bp856758 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content69% 
IMG OID644991124 
Productpredicted membrane protein 
Protein accessionYP_003148659 
Protein GI256824699 
COG category[S] Function unknown 
COG ID[COG2246] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.0672665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.109934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCG AGCACCACCA TCCCACCGGA CTTCGCCATG CCCTGGACGT CCTGTCCCGC 
GAGGCGAGCA AGTTCGGCGT CATCGGCCTG CTCGCCTTCA TCATCGACAC GGGCCTGTAC 
AACCTGTTGA TGTACGGGCC GGTCCTGTCC GCGAACGCCG CCCCCGAGGG CGTCCTGGGC 
GACCACCCGC TGACCAGCAA GGTGGTGGCC ACCGCCGTGG CCACGGCCTT CGCGTGGTTG 
GGCAACCGGT ACTGGACCTT CCGCAAGACG CGCCGTGCGA ACGTCACGCG CGAGGCGGCG 
CTGTTCATCC TGTTCAACAT CCTGGGCCTG CTGATCGCCC TGATCTGCCT GTGGTTCAGC 
CACTACATCC TGGGCTTCCG CTCGCAGCTG GCCGACAACA TCTCCGGCAA CGGCGTGGGC 
CTGGTGCTGG GCACCCTGTT CCGCTTCTGG GCCTACCGCA CCTTCGTCTT CACCGAGGAG 
CTCGGCGACT CCCTGGAGCC CGACCACGAC CAGACGGTCC GCACCGAGGA CGGCCGGGTG 
CTCGAGGACG ACGACTCCGA ACTGGTGCGC CCCTACGGGG TCGAGGAGCC TGCGACGCAG 
CGCCACCGGC AGGACGCCGC CGAGCCGGCC GGGCCGTCGC GCCCCATCGA CACCGCGGCC 
TGA
 
Protein sequence
MTSEHHHPTG LRHALDVLSR EASKFGVIGL LAFIIDTGLY NLLMYGPVLS ANAAPEGVLG 
DHPLTSKVVA TAVATAFAWL GNRYWTFRKT RRANVTREAA LFILFNILGL LIALICLWFS 
HYILGFRSQL ADNISGNGVG LVLGTLFRFW AYRTFVFTEE LGDSLEPDHD QTVRTEDGRV 
LEDDDSELVR PYGVEEPATQ RHRQDAAEPA GPSRPIDTAA