| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_08050 |
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| Symbol | |
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| ID | 8372314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | + |
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| Start bp | 816121 |
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| End bp | 819603 |
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| Gene Length | 3483 bp |
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| Protein Length | 1160 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644991089 |
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| Product | TrwC relaxase |
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| Protein accession | YP_003148624 |
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| Protein GI | 256824664 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR02686] conjugative relaxase domain, TrwC/TraI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGAGG CGGTGTCAGG CGTGAAAGGT GGCGTGATCC CGTTCCACGG CAACGGCGCT
GCCGCACGTC GGTATGTCGA GGCCGACCGC TCCGGGGCGG ACGAGTACTA CCTCCGCGCA
GACAACGCCA TCGCCGAATA TGTCGCGTTC GACGGCAAGG GCGAGGTCAC CGCTGCCCGG
TCGCTGTCGC CGGATGAGTA CGAGGGGTGG GTGGACTGGC ACGATCCGAT CACCGGCGAG
CCGATGGGCA CCCCGCGCAA GCCCGCCGAG GGCACCAAGG GATCACCGTT GTTCTGTGAC
ATGACGACCG ACAGCCCTAA AAGCCTGTCG GTCGCCGCCG CCCTCCACCC CGAAGTCTCC
GAAGCCCTCG ACCAAGCGCA GCAGGACGCG CTGGGCGAGA TACGCCGCTG GCTCGGTCAG
CACTCCGTGA CCCGCGTCGG CCCCCGTGAG GCACGGGAGA TTGTTCCTAT TGAGCAGATG
CAGGTGGTCG GCATCGGTCA TAAGACCTCG CGGGCGGGTG ATCCACACCG CCACATCCAC
ATGCAGATCG GCACGAGAAT CTGGGCGGCC GGGAAGTGGC GAGCACTCGA TACGGCGGCG
TTGTTCAAGC AGCAGGGCGC GATCCATGCG ATGGGCACGG CCGTGATCGC CGCGCACCCC
GAACTTGCCG AGACGTTGAG CCGCCACGGT CTCACGCTCG ACCCCGTAAG CGGTGAGGTG
GCGGAGTTGG AGCCGTTCAA TGCGGTCATG TCGAAGCGCT CAGCCCAGAT CAACCGGAAC
CTTGACCACC TCGAAGCCGA ATGGCAGACC GAGCATCCCG GCGAGACCCC TGGCCCGGTC
GTGACGGCGC GGATGCAGGG CACCGCCTGG GCTCACCAGC GACCGGGCAA GAAGCCCGCT
GATTTGAAGA ACGAGCAGTG GTGGCAGCAG GAACTCACCG ATGCCGGATA CGACCCCGAG
AACCTTGGTC GTCGTGCCGT GCAATTCTCG ATTGCGCTGG ATGCTCTGCT GGTGCAGGAG
GTCGCGTCTC GTGCGCTGGA TCGTTGCGCC GCCGGTGCAT CGGCGTGGAC GCGGCACACC
GTGCAGGAGC ACGTCACTCG CATCACCACC GAGGCAGGCG TGCAGGCGGC ACCGGAGGAG
TTGCGGGAGT TCATCGCGGT TGCGACCGGA CTTGCGACCG AGGATTGCTT CTCCGTCCTC
CCGCCGGGAG TACCGACGCC CGAGCACGTC GCCCACTTGA CCAGCCTCGG CGTGGTCGCC
GCCGAGACCG CGCTCCGCGA CCAACTCACC GCGAGCATCC CCGAGCAGGA ACCCGAGCGG
CCGGACGTGA CCGAGGCGGC ACAAGCAGCA GGGCTCGATG AGGGGCAGAC CCTTGCTGCC
GCTGCCGTGG CCTCAACCGA TCCGCTGGTG ATTGTGGAGG ATGCGGCAGG CAGTGGGAAG
ACGACCATGC TTCGCACCGC TATTGAGGTT GCCGCCGAGC ACGGCAGAAG TACGCGGGTG
GTTGCGCCGA CGAAGCGGGC GGCGCAGATC GCGCAGGAAG AACTCGGGAT ACCCGCAACC
TCGGTTGCGG CGCTAGCGTA CGCGCATGGG TGGCGGTGGA ACGCCGATGG AGTGTGGACG
CGCCTGAACC GAGGCGATAC CGACCCGATG ACTGGTGGTA TCTACACCGG CCCACCGCCA
GAGGCCGTGT TGTCGAGGGG TGGTCGTGTG GTCGTGGATG AAGTGGGCAT GCTCGACCAA
GACACCGCCC ACGCCCTCCT GACCATCACC GCCGAGGCCA GTGCGACGGT CGCGCTGGTC
GGAGACCGGG CGCAGTTGCC CGCCGTGGGC AGGGGCGGGG TGCTCGATAT GGCCGCGCAG
ATCAGGGGCC GTACCTACGA CATGAGCGAA CTGCACCGCT TCACTGACGC CGAGTACGCA
GCGCTGACGC TGGCGATGCG AGACCGAAGC AGCCCCGGTG ACGTGTTCGA CCGGCTCGCC
ACCATGCACC TCGTCACGCT CCACGCCGAC GATGATGCGG CCCGCGAGCA CATCACCGAC
CACGCCCGTG ATGGTGAGGC GATTACGGTG GCGACGAACG ACGAGGCCAC CGCCCTGAAC
GAGCGCATCC GCGCTGGGAG GGTCGAGGCG GGCAAGGTAA GCGACACCGT GACGGTGACC
GGCAGCGACG GGCTGAGCAT CGGGGCAGGT GACCTCATCC AGACGCGCCG CAACGACAGC
GATGTGGGAG TGGCGAACCG GCAGCAGTGG ATCGTTCAGC ACGTCAACTC CGAGGACGGC
ACGGTGTATG CCCGTGAGGT CGGTAGCGGA CGGAAGAACC CCCGCACCGT TGCCTTGCCT
GTCGAGTATG TGGGTGAGAA CGCGCACCTG TCCTATGCGG CGACTGCCTA CGGTGTCCAA
GGCGCAACCG TCAGCAGCTC GCACACGGCG CTGTCGGAAG CAACGAGCGC GGCAGGCGTC
TATGTCGGCA TGACGAGAGG CCGCCACACC AACCGGCTCC ACATCGTGGC CGAGGACATG
GCGGATGCGC GGGCGCAGTT CATTGAGGCG ATGAAACGCG ACCCGGCAGA CCGAGGCCTC
GACCACGCCA CCGCCCAAGC CGCCGAAGCC GTGCGCGGAT TCGTCGCAGA TGGACCGGTG
CGGCTGGTTA CCGAAGAACT CGCCCGCCTC GACCACGAAG CCGAACAAGC GGAGCGGGCG
GCGGAACGGT GGGAGCAGAC CGCAGCCAGG TTCGACGCTC AACGCGCCAC CCACCAGGCC
GAAGACAACC AAAGCGCCGC TGTGCTCCGC AAGGCCGAGG ACTCCTCTGA GCAGGTACGT
GCCGAAGTCG CCACGCCGCT GACCACGCAG GCCGAGACTG ATGGTGCCGC CTACCTCGAT
GCCGTCGCAG ACGAGGCTGC CGCCCGTGGC CGCCTCGCCA CCGTAGGCAG GTTCGGCAGG
CGCAGAGCCC GCATCGAACA CCAGGCCGCG ACCGAACGCG CCCAGTCGTT GCGCGGGCAT
GTCAGCGGCG AGTGGGGCAC CACACCGGCG AACCCTGATC GTCTCCCGGA ATGGGCAGGC
CAGGTCGCCG CAACCCGCGC CGAGGCCGAC CCTCGCGTGA CCGAGGTCGT GGAGACCGTC
GACGCGGCCA CCGCCGGCCG CGAGATAATG CGGAAGCGGC ACCGGCAGGA GCGCACGGCG
TTGCTCGTCA GCGAGTACGG GGCCGAGCAT GCCCAGGCAG CCCGGTACGG GATGCGCCGC
ACCACCAACC CCGACCGTCA AGCGCGCGAC GCCAAGAACC GGGCCGCCGC GACCCGCGCT
GAGGCCGACG AGTTGCGTAG CCTCCCGATC ACCGAAGCCG CCCGTCTGAT CGAGACCAAG
CACGCCGCAC AAGAGCAGGC ACGAGAACGT GCGGCACAGC GCGAACGACA ACTCCATGAC
CCGTTCGAGC ATGACTTGCA CCGCCACGAA CTACGGCGCG AGGGGCCGAC GCGTGGACTG
TAA
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| Protein sequence | MREAVSGVKG GVIPFHGNGA AARRYVEADR SGADEYYLRA DNAIAEYVAF DGKGEVTAAR
SLSPDEYEGW VDWHDPITGE PMGTPRKPAE GTKGSPLFCD MTTDSPKSLS VAAALHPEVS
EALDQAQQDA LGEIRRWLGQ HSVTRVGPRE AREIVPIEQM QVVGIGHKTS RAGDPHRHIH
MQIGTRIWAA GKWRALDTAA LFKQQGAIHA MGTAVIAAHP ELAETLSRHG LTLDPVSGEV
AELEPFNAVM SKRSAQINRN LDHLEAEWQT EHPGETPGPV VTARMQGTAW AHQRPGKKPA
DLKNEQWWQQ ELTDAGYDPE NLGRRAVQFS IALDALLVQE VASRALDRCA AGASAWTRHT
VQEHVTRITT EAGVQAAPEE LREFIAVATG LATEDCFSVL PPGVPTPEHV AHLTSLGVVA
AETALRDQLT ASIPEQEPER PDVTEAAQAA GLDEGQTLAA AAVASTDPLV IVEDAAGSGK
TTMLRTAIEV AAEHGRSTRV VAPTKRAAQI AQEELGIPAT SVAALAYAHG WRWNADGVWT
RLNRGDTDPM TGGIYTGPPP EAVLSRGGRV VVDEVGMLDQ DTAHALLTIT AEASATVALV
GDRAQLPAVG RGGVLDMAAQ IRGRTYDMSE LHRFTDAEYA ALTLAMRDRS SPGDVFDRLA
TMHLVTLHAD DDAAREHITD HARDGEAITV ATNDEATALN ERIRAGRVEA GKVSDTVTVT
GSDGLSIGAG DLIQTRRNDS DVGVANRQQW IVQHVNSEDG TVYAREVGSG RKNPRTVALP
VEYVGENAHL SYAATAYGVQ GATVSSSHTA LSEATSAAGV YVGMTRGRHT NRLHIVAEDM
ADARAQFIEA MKRDPADRGL DHATAQAAEA VRGFVADGPV RLVTEELARL DHEAEQAERA
AERWEQTAAR FDAQRATHQA EDNQSAAVLR KAEDSSEQVR AEVATPLTTQ AETDGAAYLD
AVADEAAARG RLATVGRFGR RRARIEHQAA TERAQSLRGH VSGEWGTTPA NPDRLPEWAG
QVAATRAEAD PRVTEVVETV DAATAGREIM RKRHRQERTA LLVSEYGAEH AQAARYGMRR
TTNPDRQARD AKNRAAATRA EADELRSLPI TEAARLIETK HAAQEQARER AAQRERQLHD
PFEHDLHRHE LRREGPTRGL
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