| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_07860 |
|---|
| Symbol | |
|---|
| ID | 8372295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 793541 |
|---|
| End bp | 794074 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644991072 |
|---|
| Product | 2'-5' RNA ligase |
|---|
| Protein accession | YP_003148607 |
|---|
| Protein GI | 256824647 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1514] 2'-5' RNA ligase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCATGG ACATCGGGGT CGCCATCCCC GTGCCGAGCC CCTGGGGGGA CGAGCTGCGC
CACGCCCGCC TGGGTTTCGG CGACGAGCAG GCGCGGGCGA TCCCGACCCA CATCACCCTG
GTGCCCCCGT TCACGATGCC GCGAGCGGCC CGCGGGGAGG TGGCCGACCA CCTGGCTGCG
GCCGCGGCCG CGACCCGGCC GTTCACCGTC GAGCTGCGGG GGACGGCGAC CTTCCGCCCC
GTCTCCCCGG TGGTGTTCAC CCCCTTGGTG CGTGGCATCG CCGAGTGCGA GCAGCTCGAG
CGGCGGGTGC ACGCCGGACC GCTGGCGATC GAGCTGCAGT TCCCGTACCA CCCCCACGTG
ACGGTGGCCC ACAACGTGCC CGACGAGGCC CTGGACCGCG CGATGGCCGA GCTGGAGGGG
CTGCGGGCCA CCTTCACCGT GGACCACTTC ACCCGGTACG TGTCCGGGCC GGACGGCGTG
TGGCGTCCGT TGGACTCCTG GGAGCTGGGC ACCGGCGCCT GCCGCACCCT CTGA
|
|---|
| Protein sequence | MTMDIGVAIP VPSPWGDELR HARLGFGDEQ ARAIPTHITL VPPFTMPRAA RGEVADHLAA
AAAATRPFTV ELRGTATFRP VSPVVFTPLV RGIAECEQLE RRVHAGPLAI ELQFPYHPHV
TVAHNVPDEA LDRAMAELEG LRATFTVDHF TRYVSGPDGV WRPLDSWELG TGACRTL
|
|---|
| |