Gene Ksed_07630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_07630 
Symbol 
ID8372272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp767433 
End bp769238 
Gene Length1806 bp 
Protein Length601 aa 
Translation table11 
GC content73% 
IMG OID644991049 
ProductABC-type multidrug transport system, ATPase and permease component 
Protein accessionYP_003148584 
Protein GI256824624 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.134302 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCC ACACCGCACC GACCACCAAT GACCCGGCCG ACGACCCCAC GGGCGTCCAG 
CGGATGCTCC CCATCGCCGA CATGGCCTCG GTCCGCCGGC ACACGGCCAG CACGCTGGCC
CGCCACCGGT CCCCGCTGGT GGTCATGGCG CTGCTGCACG GTCTGGCGGC CGCCCTCGGC
CTGGTCACAC CGTGGATCAT CGGCCGGATC GTCGACGGCC TGACGAACGG GTCCCTGCTC
GGGGACGCCG GATTCGACCG CGGCCTGGGC CTGGTGGCCG GGATGGCCCT GGCGATCCTG
GGCCAGACCG TCGCCTCGTG GTTCGCGAAC CGGGCGAGCT TCGTCCTCGG TGAGGAGATC
TTCGCCGACC TGCGCGAGGA GTTCATGGCC CGGGTGGTGC GGCTGCCGCT CTCCACCGTC
GAGCGCGCCG GCACCGGCGA CCTGCTGAGC CGGACCACCG GCGACGTGGA GTCCCTGAGC
TACGTGGTGC GCTTCGGCCT GCCCTCGATC CTGGTGGGCA CGGTCACGCT GGTGGTGACC
GTCATCGCCT CGGTGGTCAC GAGCCCGGTC GTGGCCCTGG CGCTGGTCGT GATCCCCGTC
ATCCTCTTCC TCCCCACCCG CTGGTACCTG CGCCGCGCCC CGCGCGCCTA CGCCCGGGAG
CGGGCCCAGT GGGCGCGCCT CAACGGCGTG GTCAGCGAGA GCGTGGAGGG GGCGCGCACG
GTCGAGGCCC TGCAGCTGCA GGCGCGTCGC CGCGCGGTCT CCGACGAGGT GCTCTCCGAC
ATCCTCGATG CGGAGAAGGG CACCCTTCGC CTGCGGCTGT GGTGGTTCCC GTCCCTGGAC
CTCGCCTTCA ACCTGCCGGC GGCGGTCGCC CTGCTGTGGG GTGGCGTGGC GGTCTCCCAG
GGGTGGGCCA GCATCGGTGA GGTGACGGCG GTGGTGCTCT ACGTGCAGAT GCTGCACGAG
CCGCTGAGTC AGCTGCTGGG CTGGTTGGAC GAGCTGCAGG TGGCCGCCAC CTCGTTGGCC
CGTGTGATCG GCATCGCCGA CGTGCCGGCG GACCGCTCCC CCGGGACGGC TCGCCCCGTC
GGCGAGGAGC TCACGGCCAC CGACGTGCGC TACCACTACC GCCCGGACAA GGAGGTCCTC
CACGGGGTGA GCCTCGACCT GAAGCCTGGG GAGCGGCTGG CGATCGTCGG CTCCTCCGGC
GCCGGCAAGT CGACCCTCGG GCGCCTGCTG GCCGGCATCG ACGGGCCCAC CCAGGGCTCG
GTCACCGTCG GCGGGGTGCC TCTGCTGGGC CTGCCCCTGG ATGACCTGCG GGGGGCGGTC
GCCCTGGTCA CGCAGGAGCA CCACGTCTTC GTCGGCACCC TGGAGGAGAA CCTGCGCCTT
GCCCGGCCCG GCGCCACCGA GGACGAGCTG TGGTCCGCCC TGGATGCGGT GGACGCCGCC
TGGGTGCGCG CGCTGCCCGA GGCCCTCGGG ACCACCGTGG GCTCGGGCGG ACTGCGTCTG
ACCGACTCCC GCGCGCAGCA GGTGGCGCTG GCCCGGTTGG TGCTGGCGGA TCCGCACACG
CTGGTGCTGG ACGAGGCGAC CTCCCTGCTC GACCCGCGCG CCGCCCGGCA CCTCGAGCGC
TCGATGGGGG CGGTGATGAC CGGCCGGACC GTCGTCGCCA TCGCCCACCG CCTGCACACT
GCCCACGATG CGGACCGGGT CGCCGTCATG GAGGATGGAC GCATCACCGA GCTGGGTTCC
CACGACCAGC TCGTGGCCGA GGGGGGCGCC TATGCCCGCC TGTGGGAGAG CTGGAGGCAG
GAATGA
 
Protein sequence
MSTHTAPTTN DPADDPTGVQ RMLPIADMAS VRRHTASTLA RHRSPLVVMA LLHGLAAALG 
LVTPWIIGRI VDGLTNGSLL GDAGFDRGLG LVAGMALAIL GQTVASWFAN RASFVLGEEI
FADLREEFMA RVVRLPLSTV ERAGTGDLLS RTTGDVESLS YVVRFGLPSI LVGTVTLVVT
VIASVVTSPV VALALVVIPV ILFLPTRWYL RRAPRAYARE RAQWARLNGV VSESVEGART
VEALQLQARR RAVSDEVLSD ILDAEKGTLR LRLWWFPSLD LAFNLPAAVA LLWGGVAVSQ
GWASIGEVTA VVLYVQMLHE PLSQLLGWLD ELQVAATSLA RVIGIADVPA DRSPGTARPV
GEELTATDVR YHYRPDKEVL HGVSLDLKPG ERLAIVGSSG AGKSTLGRLL AGIDGPTQGS
VTVGGVPLLG LPLDDLRGAV ALVTQEHHVF VGTLEENLRL ARPGATEDEL WSALDAVDAA
WVRALPEALG TTVGSGGLRL TDSRAQQVAL ARLVLADPHT LVLDEATSLL DPRAARHLER
SMGAVMTGRT VVAIAHRLHT AHDADRVAVM EDGRITELGS HDQLVAEGGA YARLWESWRQ
E