Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_07630 |
Symbol | |
ID | 8372272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 767433 |
End bp | 769238 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644991049 |
Product | ABC-type multidrug transport system, ATPase and permease component |
Protein accession | YP_003148584 |
Protein GI | 256824624 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.134302 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACCC ACACCGCACC GACCACCAAT GACCCGGCCG ACGACCCCAC GGGCGTCCAG CGGATGCTCC CCATCGCCGA CATGGCCTCG GTCCGCCGGC ACACGGCCAG CACGCTGGCC CGCCACCGGT CCCCGCTGGT GGTCATGGCG CTGCTGCACG GTCTGGCGGC CGCCCTCGGC CTGGTCACAC CGTGGATCAT CGGCCGGATC GTCGACGGCC TGACGAACGG GTCCCTGCTC GGGGACGCCG GATTCGACCG CGGCCTGGGC CTGGTGGCCG GGATGGCCCT GGCGATCCTG GGCCAGACCG TCGCCTCGTG GTTCGCGAAC CGGGCGAGCT TCGTCCTCGG TGAGGAGATC TTCGCCGACC TGCGCGAGGA GTTCATGGCC CGGGTGGTGC GGCTGCCGCT CTCCACCGTC GAGCGCGCCG GCACCGGCGA CCTGCTGAGC CGGACCACCG GCGACGTGGA GTCCCTGAGC TACGTGGTGC GCTTCGGCCT GCCCTCGATC CTGGTGGGCA CGGTCACGCT GGTGGTGACC GTCATCGCCT CGGTGGTCAC GAGCCCGGTC GTGGCCCTGG CGCTGGTCGT GATCCCCGTC ATCCTCTTCC TCCCCACCCG CTGGTACCTG CGCCGCGCCC CGCGCGCCTA CGCCCGGGAG CGGGCCCAGT GGGCGCGCCT CAACGGCGTG GTCAGCGAGA GCGTGGAGGG GGCGCGCACG GTCGAGGCCC TGCAGCTGCA GGCGCGTCGC CGCGCGGTCT CCGACGAGGT GCTCTCCGAC ATCCTCGATG CGGAGAAGGG CACCCTTCGC CTGCGGCTGT GGTGGTTCCC GTCCCTGGAC CTCGCCTTCA ACCTGCCGGC GGCGGTCGCC CTGCTGTGGG GTGGCGTGGC GGTCTCCCAG GGGTGGGCCA GCATCGGTGA GGTGACGGCG GTGGTGCTCT ACGTGCAGAT GCTGCACGAG CCGCTGAGTC AGCTGCTGGG CTGGTTGGAC GAGCTGCAGG TGGCCGCCAC CTCGTTGGCC CGTGTGATCG GCATCGCCGA CGTGCCGGCG GACCGCTCCC CCGGGACGGC TCGCCCCGTC GGCGAGGAGC TCACGGCCAC CGACGTGCGC TACCACTACC GCCCGGACAA GGAGGTCCTC CACGGGGTGA GCCTCGACCT GAAGCCTGGG GAGCGGCTGG CGATCGTCGG CTCCTCCGGC GCCGGCAAGT CGACCCTCGG GCGCCTGCTG GCCGGCATCG ACGGGCCCAC CCAGGGCTCG GTCACCGTCG GCGGGGTGCC TCTGCTGGGC CTGCCCCTGG ATGACCTGCG GGGGGCGGTC GCCCTGGTCA CGCAGGAGCA CCACGTCTTC GTCGGCACCC TGGAGGAGAA CCTGCGCCTT GCCCGGCCCG GCGCCACCGA GGACGAGCTG TGGTCCGCCC TGGATGCGGT GGACGCCGCC TGGGTGCGCG CGCTGCCCGA GGCCCTCGGG ACCACCGTGG GCTCGGGCGG ACTGCGTCTG ACCGACTCCC GCGCGCAGCA GGTGGCGCTG GCCCGGTTGG TGCTGGCGGA TCCGCACACG CTGGTGCTGG ACGAGGCGAC CTCCCTGCTC GACCCGCGCG CCGCCCGGCA CCTCGAGCGC TCGATGGGGG CGGTGATGAC CGGCCGGACC GTCGTCGCCA TCGCCCACCG CCTGCACACT GCCCACGATG CGGACCGGGT CGCCGTCATG GAGGATGGAC GCATCACCGA GCTGGGTTCC CACGACCAGC TCGTGGCCGA GGGGGGCGCC TATGCCCGCC TGTGGGAGAG CTGGAGGCAG GAATGA
|
Protein sequence | MSTHTAPTTN DPADDPTGVQ RMLPIADMAS VRRHTASTLA RHRSPLVVMA LLHGLAAALG LVTPWIIGRI VDGLTNGSLL GDAGFDRGLG LVAGMALAIL GQTVASWFAN RASFVLGEEI FADLREEFMA RVVRLPLSTV ERAGTGDLLS RTTGDVESLS YVVRFGLPSI LVGTVTLVVT VIASVVTSPV VALALVVIPV ILFLPTRWYL RRAPRAYARE RAQWARLNGV VSESVEGART VEALQLQARR RAVSDEVLSD ILDAEKGTLR LRLWWFPSLD LAFNLPAAVA LLWGGVAVSQ GWASIGEVTA VVLYVQMLHE PLSQLLGWLD ELQVAATSLA RVIGIADVPA DRSPGTARPV GEELTATDVR YHYRPDKEVL HGVSLDLKPG ERLAIVGSSG AGKSTLGRLL AGIDGPTQGS VTVGGVPLLG LPLDDLRGAV ALVTQEHHVF VGTLEENLRL ARPGATEDEL WSALDAVDAA WVRALPEALG TTVGSGGLRL TDSRAQQVAL ARLVLADPHT LVLDEATSLL DPRAARHLER SMGAVMTGRT VVAIAHRLHT AHDADRVAVM EDGRITELGS HDQLVAEGGA YARLWESWRQ E
|
| |