Gene Ksed_07330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_07330 
Symbol 
ID8372242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp732417 
End bp733808 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content71% 
IMG OID644991019 
Productfumarase 
Protein accessionYP_003148557 
Protein GI256824597 
COG category[C] Energy production and conversion 
COG ID[COG0114] Fumarase 
TIGRFAM ID[TIGR00979] fumarate hydratase, class II 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.24875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGT ACCGCACTGA ACACGACTCC ATGGGTGAGA TGCAGGTGCC GGCCGAGGCG 
CTCTACGGCG CCTCGACCGC ACGCGCCGTG GAGAACTTCC CGATCTCCGG CCGCCCCGTG
CCCGGCGCCG TCATCCACGC CTTCGGCCAG CTCAAGGCCG CCGCGGCCCG CGCCAACGCC
GAGCTGGGCA ACCTGGACCA GGCCAAGGCC GACGCCATCG TGGCCGCCGC CGAGGCCGTG
GCCCGTGGCG AGCACGACGA GCACTTCCCG GTGGACATCT TCCAGACCGG GTCGGGCACC
TCGACGAACA TGAACTCCAA CGAGGTCATC GCCACCCTGG CCCGCCAGGC GGGCACCGAC
GTGCACCCCA ACGACGACGT GAACATGGGG CAGTCCTCCA ACGACACCTT CCCCACCGCC
ATGCGGGTGG CGATGGTGCA GGGCGTGGCC GAGCGCCTGG AGCCCGCGCT GAAGACGCTG
CAGAAGGCAC TCGAGGCCAA GGCGACGGAG TTCGCCGAGG TGGTCAAGGC CGGCCGCACC
CACCTGATGG ACGCCGTCCC GGTGACCCTG GGCCAGGAGT TCGGGGGCTA CGCCCGCCAG
ATCGAGCTCG GCCGGGAGCG CCTCGCCCAG GCCGCGCAGG CCGTCGCCGA GCTGCCGCTG
GGCGGTACCG CGGCAGGCAC CGGTCTGAAC GCCCACCCGG AGTTCGCCGG CAAGGCGATC
GCCGACCTCT CACGCCAGGT CGGAGTGGAC ATGCGCGAGG CAGCAGACCA CTTCGAGGCC
CAGTCGACGC AGGACGCCGT GGTGCACCTC TCGGCAGCCA CCCGCCTGCT CGCGGTCAGC
CTGACCAAGA TCTGCAACGA CCTGCGGTGG ATGGGCTCCG GCCCCCGCGC CGGCCTGGGC
GAGCTGCGCC TACCAGAGCT GCAGCCCGGC TCCTCGATCA TGCCCGGCAA GGTGAACCCC
GTCGTGCCCG AGGCCACGCT GATGGTGTGC GCCCGCGTGA TCGGCAACGA CGCCACCATC
GCCTTCGGCG GCGCGTCCGG CTCGTTCGAG CTGAACGTGA TGCTGCCGGT CATGGCCACC
GACATGCTCG ACTCGATCGA CCTGCTGGCC GGGGCGAGCC GCGTGCTGGC CGACCGGTGC
GTGAGCGGGC TGGAGGCCAA CACCGAGCAG CTGGCCGAGT ACGCCGGCGC CTCCACCGCC
ATCGTGACGG CACTCAACTC GGCGATCGGC TACGAGGCGG CCTCCAAGGT GGCCAAGCAG
TCCTTGGCCG AGAAGAAGAC CGTGCGCCAG GTGGTCATCG ACCGCGGCCA CGTGGAGAAC
GGCGACCTCA CCGAGGAGCA GCTGGACCAG GCGCTCGACC TGCTGGGCAT GGCCACGCCG
CACGGCCGCT GA
 
Protein sequence
MTEYRTEHDS MGEMQVPAEA LYGASTARAV ENFPISGRPV PGAVIHAFGQ LKAAAARANA 
ELGNLDQAKA DAIVAAAEAV ARGEHDEHFP VDIFQTGSGT STNMNSNEVI ATLARQAGTD
VHPNDDVNMG QSSNDTFPTA MRVAMVQGVA ERLEPALKTL QKALEAKATE FAEVVKAGRT
HLMDAVPVTL GQEFGGYARQ IELGRERLAQ AAQAVAELPL GGTAAGTGLN AHPEFAGKAI
ADLSRQVGVD MREAADHFEA QSTQDAVVHL SAATRLLAVS LTKICNDLRW MGSGPRAGLG
ELRLPELQPG SSIMPGKVNP VVPEATLMVC ARVIGNDATI AFGGASGSFE LNVMLPVMAT
DMLDSIDLLA GASRVLADRC VSGLEANTEQ LAEYAGASTA IVTALNSAIG YEAASKVAKQ
SLAEKKTVRQ VVIDRGHVEN GDLTEEQLDQ ALDLLGMATP HGR