Gene Ksed_07300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_07300 
Symbol 
ID8372239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp728354 
End bp729142 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content71% 
IMG OID644991016 
ProductUndecaprenyl pyrophosphate synthetase 
Protein accessionYP_003148554 
Protein GI256824594 
COG category[I] Lipid transport and metabolism 
COG ID[COG0020] Undecaprenyl pyrophosphate synthase 
TIGRFAM ID[TIGR00055] undecaprenyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value0.675259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.637339 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGAGT CGACCCGGGG CTCCGCGGGC CGCGTGCGCG GCCTGGTCTA CGGCGCCTAC 
GAGCAGCGGA TCTCGCAGGA CCTGGACACC GACCGCCTGC CCTGCCACGT CGGGGTGATG
CTGGACGGCA ACCGGCGGTG GGCGCGGGCA CGCGGCTCGG ACCCTGCCGC GGGCCACCGG
GCGGGGGCGG AGAACATCGA GCCCTTCCTC GACTGGTGCG AGGAGCTGGG CATCGAGGTC
GTGACCCTGT GGATGCTCTC GACAGACAAC CTGCAGCGCC CGGCCGCCGA GCTGGAGCCG
CTCCTGCGGA TCATCGAGAA GGCCGTGTGC GACCTGGCCG CCACCGGCCG CTGGCGCCTC
CACCTCGTGG GTGCCTTGGG GCTGCTGCCC GACGCGAGTC GGGATGTGCT CGAGGACGCG
GTGCGCCAGA CCGCCGAGGT CGACGGGCTG CTGGTGAACG TCGCCATCAG CTATGGGGGG
CGGCAGGAGA TCAGCGATGC GGTGGCTGCC CTGTTGCGCG AATGGGACGC CTGCGGGGTC
AGCCTGGCCG AGGCCGCCGA GCGCATGACT CCCGAGGCGA TCGGCGAGCA CCTGTACACG
AAGGGGCAGC CGGACCCGGA CCTGGTGATC CGCACCTCCG GCGAGCAGCG CCTGAGCGGA
TTCCTGCTCT GGCAGAGCGA GAAGAGCGAG TACTACTTCT GTGAGGCCTA CTGGCCCGAT
TTCCGCCGCG TGGACTTCCT GCGCGCCCTG CGGGCCTACG CGGAACGGGA ACGCCGCTAC
GGGCGCTGA
 
Protein sequence
MSESTRGSAG RVRGLVYGAY EQRISQDLDT DRLPCHVGVM LDGNRRWARA RGSDPAAGHR 
AGAENIEPFL DWCEELGIEV VTLWMLSTDN LQRPAAELEP LLRIIEKAVC DLAATGRWRL
HLVGALGLLP DASRDVLEDA VRQTAEVDGL LVNVAISYGG RQEISDAVAA LLREWDACGV
SLAEAAERMT PEAIGEHLYT KGQPDPDLVI RTSGEQRLSG FLLWQSEKSE YYFCEAYWPD
FRRVDFLRAL RAYAERERRY GR