Gene Ksed_06860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_06860 
Symbol 
ID8372195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp678803 
End bp679774 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content71% 
IMG OID644990972 
ProductABC-type multidrug transport system, ATPase component 
Protein accessionYP_003148511 
Protein GI256824551 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTGT GGAGCACCCA AGGGCTCACC AAGAGATTCG GCACCTTCAC GGCGGTGAGC 
GACCTGACGC TCTCGGTCGG CGAGGGTGTC ACCGGCGTGG TCGGACACAA CGGGGCGGGC
AAGTCGACGC TGATCCGCAT GCTGCTGGGG CTGGAGCCAC CCACCTCCGG GACGGCCACC
ATCTTCGGCA TCGACGCCAC GCAGAACCCG CTCGAGGCCC GTGCCCGGGT GGGGTTCATG
CCGGAGTACG ACTGCATGCC GCCGGACGTC AGCGCCGCGC AGTCGATCAT GCACTTCGGC
CGCATCTCCG GCCTGCCCCG GGACATCGCC CGTGAGCGGG CCTCGGACGT GCTGCGGCAC
GTGGGCCTCG ACGAGGCACG CCACCGCCCG GTCGGCACCT ACTCCACCGG CATGAAGCAG
CGCGCCAAGC TCGCGCAGGC CCTGGTGCAC GACCCGGACC TGATCATGCT CGATGAACCC
ACGAACGGGC TCGACCCCTC CGGCCGGGAC GAGATGCTCG GCCTGATCCA GCGCATCGGG
CACGAGTTCG GCATCTCCGT GCTGGTCACC TCCCACCTGC TCGGTGAGCT GGAGCGCATC
TGCGACCACG TCGTCGTCCT GGACGGCGGC CGGTTGGTCA CCTCCTCGTC CATCTCCGAC
CTGACGGCAG ACACGGGCGC GCTGGAGGTG GAGGTCATCG GCACCGACGA GCGGTCGCCC
GCACCGCAGC TGATCGCCGC GCTGCACTGC CGCGGCATCG AGGCCGGGCG CAGCGGCGGG
ATGGTGATCA TCCCGCAGGC CTCGGACGAG GCCCGCGCCG CCGTGGTCGA GCTCTGCGCC
GACAACGGCT GGGGGCTGTC CCGCATGACG GGTTCGCGCC ACCAGCTCTC CGAACTGTTC
CTGGGCGAGG GCGACAGCCC CGAGGTGTCG CAGGGGTCCG GCGCCACGCG AGACGGGCAG
GAAGCAGCAT GA
 
Protein sequence
MDVWSTQGLT KRFGTFTAVS DLTLSVGEGV TGVVGHNGAG KSTLIRMLLG LEPPTSGTAT 
IFGIDATQNP LEARARVGFM PEYDCMPPDV SAAQSIMHFG RISGLPRDIA RERASDVLRH
VGLDEARHRP VGTYSTGMKQ RAKLAQALVH DPDLIMLDEP TNGLDPSGRD EMLGLIQRIG
HEFGISVLVT SHLLGELERI CDHVVVLDGG RLVTSSSISD LTADTGALEV EVIGTDERSP
APQLIAALHC RGIEAGRSGG MVIIPQASDE ARAAVVELCA DNGWGLSRMT GSRHQLSELF
LGEGDSPEVS QGSGATRDGQ EAA