| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_06300 |
|---|
| Symbol | |
|---|
| ID | 8372139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 623024 |
|---|
| End bp | 625588 |
|---|
| Gene Length | 2565 bp |
|---|
| Protein Length | 854 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644990917 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003148457 |
|---|
| Protein GI | 256824497 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4694] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACAGACG CGACGCCACC TCAACGGGTA GACCCGCGCG ACCTGCTCAG CGAGTGGGCG
AACACCTCCG ACGAGTGGGT CCGCTACATC GTGAGGCACG TCCTCAACGG CCGCGGGCCG
CTCGGAAGCG AGGAGCAATC CGGAACTTAC GTCCTGTTTC GCCAGGAGAA AGCCTTCGAT
ACCCGCGAAC TCCCCACGGA GGAGCCGCTG TTCACCCTCG AACGCGAGGA TGAGGCGATC
GAGCCGCTGA CCCTTACCTC GCTCTCCGAT GTCGTTGGTG TCAACGCCTT GGTAGAGGGC
GGAGTCATCG AGCCGCATGC CGGCTTGACG ATCTTGTTCG GAGAGAACGG CACGGGCAAG
ACGGGGTACT CCCGCATCTT CAAAGCCCTC GCGGCGAGCC GCACTGCCGA TGTGATCCTC
GGCGACATCG AAGCGGCATC GCCGCAGCCC CAATCAGCAC TTGTCGGCTA CACGCTCGGC
ACTGAGACGA AGACCTACAC CTGGACCGGA CAACAGGGCG TCGCGCCCTT CACCAGGATG
TCCATCTTCG ACAGCCCTTC TGTCAGCTTC CACGTCGATG ACGACCTTGA GTACGTCTAC
GTGCCAGCAG CCCTGGCACT GTTCAATCAT GTCATCGCAG GCATCAAGTC GGTACAAGCC
CACATCGACC AGGCCGTCGA AGACCTACGA TCTGGGTCCA CAGGGCTTCT GTCTCGCTTC
CCACGCACTG CCGCGGTTTA CCCGCTCATC GAGACACTGG GAGCGTCCAC TGATCTGGAA
CACCTGAGGT CGCTCGCCGA CTCCGATCCC GACGTCGAGA CACGTATCGG CGACCTTCGC
CGCACGGTCG CCGCGCTGGA GGCGGACACC ATCAGCGCTG AGATCAAGCT GCAACAGCGA
GTCGAACGCG TCTTGACGCA AGCTTCCAAC GCGGCCACCG TGATGGCTGA CTTCAACGTG
GAGGCATACG GCCGCGAACG CGACACCCTC CACGGACTTG AAGAGGACTA CCGCGCCTTC
CGAGCCGCCC TGTTCGAGGC AGCCGACCTG CCGGCCGAGC CCGACGACAC CTGGAGCACG
TTCGTCGAGG CCGGCGAGGC ATACCAAGCA CATCTCATCG CGGTCGGAGC ACACGACGCC
GATCGGTGTC TGTACTGTCG GCAGCCTCTG AACGAAGCGG CGCGATCGCT GATCGGCAAG
TACTCCGAAT ACATGGAAGA CAAGATCACC ACTGACATCG CCGCTTCAAA GGCGCGGCTC
CACGCACTTA CAGAACCGGT CACCTCGATC CAGGTCAACG ACGTCTCTAC CTTCGCCGAC
GAGTACGCAG ATACCGAGGA CAAGCCCCAC TTCCACGTTG AACTCGACCG GACCCTGAGC
ACCATCGCGG AGCTATCCGA GCAGCTTCTC GCCGCTTCCG CCGTGAACGC AGCGCTGACC
GAACACGCCG GCACAGATGC GATAGCGCTC GGCTCGGCGC TGGAGACCGC CAAGCGGGCC
CTCGGTGAAC TGAGGACACA GGCAGCCACA CGGGCTGACA CCTTGGCCGA GAAGAAGAAG
GAGCTTGTCG AGCTAGAAGC CGCAGCAGAA CTGACGAAGT CGTGGACGCT CATCGAGTCA
CACGTACGCG ACGCCAAGCA GGCTGACCGG CTCATGCTGC TCGCCAAGCC CATGCCTGGG
CTCCTGCGCG CTGTAACCGG GCTGGCCAAG ACCGCGAGTG ACCAGATGAT CAACGAGAGC
TTCGATGCGC TTTTCAGCGA AGAGTGCGCG GCACTTCGCG CGCCCGCGCT ACACGTGGAG
TTCGTCGGCC GCCAGGGGCG CGCACAACGC CGCAAGATCC TCAGCGGGAA ACACAAACCG
TCCAAGGTGC TCTCCGAAGG AGAGCAGAAG GTCCTCGCAA TAGCGGACTT CCTCGCCGAA
GCGCGCCTCG CCGGAATCAC CGCGCCGGTC ATTTTCGATG ATCCTGTCTC AAGCCTCGAC
CATCGCCGCA TCAACGAAGT CGCGCAGCGC GTCGCGTCGC TCGCTGACAC GACACAGGTC
ATCGTCTTCA CCCACGACAT CTTCTTCGCC AGCACGCTGC TTACGCTCAT GGAAGCAACC
AAGCGCTGCT CCTACTTCCA GATCACCGAT GAAGAGGGCA AAGGAAAGGT CACCCGAGCG
ACAGGACCCC GCTGGGACAG CTTGAACAAC ATCAAGAAGA ACATCAACGA GACCATCCAG
GCAGCAAAGT CACAGGACGG CGATGCGCGG GCGGCACTGG TCCGCACAGG TTACGACTGG
GTGCGCGCGT GGTGTGAGGT CTTCACCGAG ACTGAACTAC TCCAGGGCGT CACGCAGCGC
TATCAACCCA ACGTGCGCAT GACTAATTTG CCCAAGATCA AGTCCGAGGC ACTTCCCGCT
GCGATCGGTA CCGTCAACCG CATCTTCGAG GAAGCATGTC GGTACATCGA CGGCCACTCA
CAACCCCTGC CTAGCCTCGG GGTCAGCCCT ACGCTCGCCG GACTCGAAGC CCACTGGGCC
GAGCTGACCG AAGCGCGAAA CGCTTACAAC TCGGCGACTC CTTAG
|
|---|
| Protein sequence | MTDATPPQRV DPRDLLSEWA NTSDEWVRYI VRHVLNGRGP LGSEEQSGTY VLFRQEKAFD
TRELPTEEPL FTLEREDEAI EPLTLTSLSD VVGVNALVEG GVIEPHAGLT ILFGENGTGK
TGYSRIFKAL AASRTADVIL GDIEAASPQP QSALVGYTLG TETKTYTWTG QQGVAPFTRM
SIFDSPSVSF HVDDDLEYVY VPAALALFNH VIAGIKSVQA HIDQAVEDLR SGSTGLLSRF
PRTAAVYPLI ETLGASTDLE HLRSLADSDP DVETRIGDLR RTVAALEADT ISAEIKLQQR
VERVLTQASN AATVMADFNV EAYGRERDTL HGLEEDYRAF RAALFEAADL PAEPDDTWST
FVEAGEAYQA HLIAVGAHDA DRCLYCRQPL NEAARSLIGK YSEYMEDKIT TDIAASKARL
HALTEPVTSI QVNDVSTFAD EYADTEDKPH FHVELDRTLS TIAELSEQLL AASAVNAALT
EHAGTDAIAL GSALETAKRA LGELRTQAAT RADTLAEKKK ELVELEAAAE LTKSWTLIES
HVRDAKQADR LMLLAKPMPG LLRAVTGLAK TASDQMINES FDALFSEECA ALRAPALHVE
FVGRQGRAQR RKILSGKHKP SKVLSEGEQK VLAIADFLAE ARLAGITAPV IFDDPVSSLD
HRRINEVAQR VASLADTTQV IVFTHDIFFA STLLTLMEAT KRCSYFQITD EEGKGKVTRA
TGPRWDSLNN IKKNINETIQ AAKSQDGDAR AALVRTGYDW VRAWCEVFTE TELLQGVTQR
YQPNVRMTNL PKIKSEALPA AIGTVNRIFE EACRYIDGHS QPLPSLGVSP TLAGLEAHWA
ELTEARNAYN SATP
|
|---|
| |