Gene Ksed_05790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_05790 
Symbol 
ID8372088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp580457 
End bp581104 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content74% 
IMG OID644990868 
Producttranscriptional regulator 
Protein accessionYP_003148411 
Protein GI256824451 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.415819 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACAC GTGAGGAGAC GAAGCAGCAG ACCCGGGCGC GGATCCTCCA CGCCGCGCGG 
AAGGAGATCG CAGAGCGCGG GGGCGTGGGG CTGTCCATGC GGGCCGTGGC CCGGGGCAGC
GACCTGGTCT CGTCAGCGGT GTACCGCTAC TTCCCTTCCC GGGAGGCTCT GCTCACCGCG
ATGATCATCG AGAGCTACGA GCACCTCGCC GGAGCCCTGG GAGAGGCTCC GGACGGCTCA
CCCGCGGATC GGTGGCGGCA CCTGGCGTCA GCCTTCCGCG ACTGGGCGCG CCAGCACCCC
CACGAGTTCC AGCTGATCTA CGGCACCCCG ATCCCCGGCT ACCAGGCACC GCCGGAGACG
GTGCCTGCCG CGACGGCCGT GGCGAGCCCC TTCCTGGCGG CGGCCCGGAA CGGGGCCGCG
GCGGCCTCGA GGTTCGCCGG GGCGGAGCTG CTGGACCAGC TGGCGGGCCC AGCGTCCGAG
CTCGACGCGG AACCGGCCCG GCTGGGGGCC GTGCTCGCCG AGCTGGCGGC CCTCGTGGGC
GTGGTCAGCT TGGAGCTCGC CGGACACCTC GTGGGGACCG CCGACCCCGC GGACCACCTC
TTCGCAGCCC TCGTGGAGCG ACAGGTGACC ACCCTGGGGC TGGACTGA
 
Protein sequence
MGTREETKQQ TRARILHAAR KEIAERGGVG LSMRAVARGS DLVSSAVYRY FPSREALLTA 
MIIESYEHLA GALGEAPDGS PADRWRHLAS AFRDWARQHP HEFQLIYGTP IPGYQAPPET
VPAATAVASP FLAAARNGAA AASRFAGAEL LDQLAGPASE LDAEPARLGA VLAELAALVG
VVSLELAGHL VGTADPADHL FAALVERQVT TLGLD