Gene Ksed_05640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_05640 
Symbol 
ID8372073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp565076 
End bp565783 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content74% 
IMG OID644990853 
ProductrRNA methylase 
Protein accessionYP_003148396 
Protein GI256824436 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value0.480906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.641593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGACC CCACGCCCCG CTCCAGCCAG CCCGAGCACG ATGCGGGCAC CGGCCCGGCG 
CGCGTCGTCG GGGTGGGTCC GTGGGAGGGC CCCTGGCCCC GGGACGACGC GGGCGAGCTG
CCGGCGCACC TGGACCCCGA GCTGCTCGAG CACGGCGACC GCCGCAACGT GGCCGACGCG
TTCCGCTACT GGAGCCAGTC GGCGATCGTC GCGGCCCTGG ACGAGCGGCG CCACGGGTTG
CACGTGGCCG TGGAGAACTG GGGGCACGAC TTCAACATCG GCTCGGTGAT CCGTAGCGCC
AACGCGTTCA ACGTGGCGGC CTTCCACATC GTCGGGCGAC GCCGCTGGAA CCGGCGGGGG
GCCATGGTCA CCGACCGCTA CCAGCACGAG TTCCACCACG CCGATGCGGG GGAGCTGGCC
GCGTGGGCGG CCGCCGCTCC TCGACAGGAC GGGGGCACGG GGCTGCCGCT GATCGGCATC
GACAACCTGC CCGGATCCGT GGCGCTCGAG GGGTACATGC TGCCTGCCGA GTGCGTGATG
GTCTTCGGCC AGGAGGGGCC CGGCCTGACG CCGGAGGTGG TCGCGCGCTG TGAGGCGGTG
CTCCACATCG AGCAGTTCGG GTCCACCCGG TCGATCAACG CCGGGGCGGC CGCGGCGGTG
GCGATGCACG CCTGGGTGCG CCAGCACATC CACGGCCTGC CGGCCTGA
 
Protein sequence
MPDPTPRSSQ PEHDAGTGPA RVVGVGPWEG PWPRDDAGEL PAHLDPELLE HGDRRNVADA 
FRYWSQSAIV AALDERRHGL HVAVENWGHD FNIGSVIRSA NAFNVAAFHI VGRRRWNRRG
AMVTDRYQHE FHHADAGELA AWAAAAPRQD GGTGLPLIGI DNLPGSVALE GYMLPAECVM
VFGQEGPGLT PEVVARCEAV LHIEQFGSTR SINAGAAAAV AMHAWVRQHI HGLPA