Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_05640 |
Symbol | |
ID | 8372073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 565076 |
End bp | 565783 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644990853 |
Product | rRNA methylase |
Protein accession | YP_003148396 |
Protein GI | 256824436 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 0.480906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.641593 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTGACC CCACGCCCCG CTCCAGCCAG CCCGAGCACG ATGCGGGCAC CGGCCCGGCG CGCGTCGTCG GGGTGGGTCC GTGGGAGGGC CCCTGGCCCC GGGACGACGC GGGCGAGCTG CCGGCGCACC TGGACCCCGA GCTGCTCGAG CACGGCGACC GCCGCAACGT GGCCGACGCG TTCCGCTACT GGAGCCAGTC GGCGATCGTC GCGGCCCTGG ACGAGCGGCG CCACGGGTTG CACGTGGCCG TGGAGAACTG GGGGCACGAC TTCAACATCG GCTCGGTGAT CCGTAGCGCC AACGCGTTCA ACGTGGCGGC CTTCCACATC GTCGGGCGAC GCCGCTGGAA CCGGCGGGGG GCCATGGTCA CCGACCGCTA CCAGCACGAG TTCCACCACG CCGATGCGGG GGAGCTGGCC GCGTGGGCGG CCGCCGCTCC TCGACAGGAC GGGGGCACGG GGCTGCCGCT GATCGGCATC GACAACCTGC CCGGATCCGT GGCGCTCGAG GGGTACATGC TGCCTGCCGA GTGCGTGATG GTCTTCGGCC AGGAGGGGCC CGGCCTGACG CCGGAGGTGG TCGCGCGCTG TGAGGCGGTG CTCCACATCG AGCAGTTCGG GTCCACCCGG TCGATCAACG CCGGGGCGGC CGCGGCGGTG GCGATGCACG CCTGGGTGCG CCAGCACATC CACGGCCTGC CGGCCTGA
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Protein sequence | MPDPTPRSSQ PEHDAGTGPA RVVGVGPWEG PWPRDDAGEL PAHLDPELLE HGDRRNVADA FRYWSQSAIV AALDERRHGL HVAVENWGHD FNIGSVIRSA NAFNVAAFHI VGRRRWNRRG AMVTDRYQHE FHHADAGELA AWAAAAPRQD GGTGLPLIGI DNLPGSVALE GYMLPAECVM VFGQEGPGLT PEVVARCEAV LHIEQFGSTR SINAGAAAAV AMHAWVRQHI HGLPA
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