Gene Ksed_05600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_05600 
Symbol 
ID8372069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp560751 
End bp562070 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content74% 
IMG OID644990849 
ProductMajor Facilitator Superfamily transporter 
Protein accessionYP_003148392 
Protein GI256824432 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.37691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.94686 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAA ACCTTCGCAA TTCCGCCTCG ATCTGGACCG AGGGGGACAT CCGCTGGATC 
CTGCCCGCGC GTCTCGCAGC CCTGCTCGGC AGCTCGGCCC TGGCCACGGC CCTGCTGCTC
ACCACCGAGG GCGCCGGGCG AGGGGCGGTG GGGGTGGCCC TGCTCATGGG GGCCGTGACC
CTGCCGGTGG TCCTCACCAT CGGCTGGACG GGCCGCCTGG CGGACACTCG CGACTCGCGC
CAGCTGCTCC TGGCCGCGAC GGCGGTCCAG CTGGCGGGTC TTGCGGGCCT GGTGGCCGCC
GTCCGTGCGC CGGGACCGGG AGGTGGCAGC GAGACCCTCT GGTGGTGGCT GACCCTGGGA
ACGGTGGCGC TCGTCCAGAC CGGCCACGCT CTCGAGCTGC CGGTCTGGCC CGCCCTGACC
GCCAAGGTGG TGGGGGACGA GCGCATCGGG GACGCCATGG CGTGGCAGCA GGGGCTCGGC
GTGCTCGCGG CACCCGCCGG GGCGCTGCTC GGCGCGTTCG CCTACTCCCT CGGCGGCGTG
GTGGCAGCCG CCGGCATCAC GGCGCTCTGC GCTCTCGCCG GGGGTGTGGC AGCACTCGCG
ATCCGGACCC GCCGGGGTGG CGGGGCGGCC ACGCACCCAC TCGCCACCGA CGAGATCGCC
GAGTCGGAGG ACGCGGAGGC CCCGCCCACC GTCTCTACCC TCCGCTGGCT CGTCACCCAC
CCGGTGCTCG GGCCGATCCT CTTGGTGCTC ACTCCACTCG TGCTCGTGGG GGAGGCGGTC
AACGTGGTGG AAGTGCTGCT CGCCCGGCAG GAGCTGGGAG CCTCGGCCGC CCAGTACGGA
TGGGGTGAGG TCGCCTTCGG GGTCGGCGCG GTCATCGGGA CGTGGGGCGT CCGGCGCGTC
ACCTCCGATG CCGCGAGGCT CGTCCTCTTC CTCGGCGGCT TCTGGGTCGT GTCCGTCCTC
ATCCTGGTCG CGGGGGTCGT CCCGTCGTGG TGGTGGTACG TCGGGCTGGC CGTCCCCATC
GGCGCCGGCA ACATGGCCGC CAACGTCAGT TCCGCCACCC TGCTGATGCT CCACACGCCC
GAGGCCCGGC GCGGGCGGGT GCAGGCCGCC TTCGTGGGCA CCGTCCGTGC CTTCTCCCTG
GGTGCCCTGG CCATCGGTGG CCTCCTCGGG TCCGCCCTCG GCCCTCGCGG CACCTACGTG
GCCTGCGGAA CCGCCGCCTG CCTGGTGATG CTGGCCGGCA GCGTCTGGCT GCACCGCGCC
CATCGTGCGG CGCGTCCCAG CGGGCGCCGG CCCCGCCGGG CTGCGACAGT TGTCCCATGA
 
Protein sequence
MKENLRNSAS IWTEGDIRWI LPARLAALLG SSALATALLL TTEGAGRGAV GVALLMGAVT 
LPVVLTIGWT GRLADTRDSR QLLLAATAVQ LAGLAGLVAA VRAPGPGGGS ETLWWWLTLG
TVALVQTGHA LELPVWPALT AKVVGDERIG DAMAWQQGLG VLAAPAGALL GAFAYSLGGV
VAAAGITALC ALAGGVAALA IRTRRGGGAA THPLATDEIA ESEDAEAPPT VSTLRWLVTH
PVLGPILLVL TPLVLVGEAV NVVEVLLARQ ELGASAAQYG WGEVAFGVGA VIGTWGVRRV
TSDAARLVLF LGGFWVVSVL ILVAGVVPSW WWYVGLAVPI GAGNMAANVS SATLLMLHTP
EARRGRVQAA FVGTVRAFSL GALAIGGLLG SALGPRGTYV ACGTAACLVM LAGSVWLHRA
HRAARPSGRR PRRAATVVP