Gene Ksed_04980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_04980 
Symbol 
ID8372007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp493342 
End bp494127 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content73% 
IMG OID644990790 
Productpredicted hydrolase or acyltransferase of alpha/beta superfamily 
Protein accessionYP_003148333 
Protein GI256824373 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value0.424876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCT CTCCGACTGA CGACGACTTC GACCGCCTGC TCAACCAGGC GCGTGACACC 
CCCGCCGACG CGCCCGCCGA CGCGCCCACC GACCCGGCGG ACGGCGGCCC GCTGGAGGGC
ACCGACCCCC GGGCCGATGC GGGGGAGCCC GCCCAGCCCA CGCCGCTGGC GCTGATCCAC
GGCATCGGGT CCAACCCCAT CGACTGGCAG GACGTGGTGA GCCGCATCGG TGCCGGCCGC
CCCATGGCCG CGCCGTGGGT GGACGGGCTC AAGCCCACCC AGAAGGGCGG TTTCGACCTG
CAGCAGTGCG CCTCGGCAGT GCTCTACAAC TCCGACGTCA TGACCTGGCG CGCGTTCGAT
GCGGTGGGCC AGGACATCGG GGGCATGGTC GCCGCGACGC TGGCGGCCGA GCACCCCGAG
AAGGTGCGGC GGCTGGTGCT GTCCGGCGTC TTCGTGCAGA TGCCGAAGAT GGCGGTGCGC
ATGCAGAAGC TCGCGCTCCA GGCACAGCCC CGCAACAACC TCGTGGCCCA GGGGATCGAC
CGGGGGCGCA CCCTGGCGGC GCTGGACTCC TTGGCCGGGA TCGACATGCG CGAGACGCTG
GCCGCCGTGC AGCAGCCCAC GCTGGTGCTC GTGGGGGCCA ACGACCGGGC GGGGAGCATC
ATGGCCAAGC AGGTCGTCGA GCTGATGCCG GACGCCCGCA TCGAGCAGGT CCCCGGGGCG
GGCCGGCGTG CCAGCATCGA CGCGCCGGAG GCGTTCGCGG ACGCCGTGAT CGCGTTCACC
GCATGA
 
Protein sequence
MSTSPTDDDF DRLLNQARDT PADAPADAPT DPADGGPLEG TDPRADAGEP AQPTPLALIH 
GIGSNPIDWQ DVVSRIGAGR PMAAPWVDGL KPTQKGGFDL QQCASAVLYN SDVMTWRAFD
AVGQDIGGMV AATLAAEHPE KVRRLVLSGV FVQMPKMAVR MQKLALQAQP RNNLVAQGID
RGRTLAALDS LAGIDMRETL AAVQQPTLVL VGANDRAGSI MAKQVVELMP DARIEQVPGA
GRRASIDAPE AFADAVIAFT A