| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_04550 |
|---|
| Symbol | |
|---|
| ID | 8371965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 449945 |
|---|
| End bp | 450817 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644990750 |
|---|
| Product | lysophospholipase |
|---|
| Protein accession | YP_003148293 |
|---|
| Protein GI | 256824333 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGCC GCACCTCACT CATCGCACTC GCCGGAACCG CTGCGATGGG GGTGACGGCC
GGGGCGCTCG CCGGTGCGCG CAAGATCAGC GGCCCGCAGC GCCCACCGCT GGACTACGCG
TTCACCCCCT TCGAGGTGCA GGTGCCGTCC GAGGACGTGA CCCTGACCGC CTCCGACGGG
ACCCGGCTGG CCGGCTGGTG GCTGGACCAG CCCGCATCGG AGCGCGTCGC GGTGGTCTGC
CACGGTCACC GTGGGTCCAA GGCGGACATG CTCGGCATCG GGCCCGGGCT GTGGCGCGAG
GGGTGGTCGG TGCTGCTCTT CGACTTCCGT GGCAACGGCG AGTCCGCCGA CGGGCCGCAG
TCGCTGGCCC ACTACGAGCA GCGGGACCTC GAGGTGGCGC TGGACCACGT GGCCGCGCGG
CGTCCCGAGG CGGAGGTCGA CCTCATCGGC TTCTCGATGG GGGCGGCCGT CGTCCTGCAG
GTCGCGGCGC GGGACCCCCG GGTGCGGCGG GTGGTGGCCG ACTCGTCCTT CGCGGACATG
CGTGGGGTGA TCGCGGCTGC GGCGCGCGGG ATGCGCCTGC CCCCGGTGCC GATGGTGCAG
CTCGTCGACC AAGCGACGCG CCTGCGCTAC GGGTACCGAT TCGCCGAGGT GCAGCCGGTC
GAGGTGGTGG CCGACATCGC CCCGCGGCCG CTGCTGTTGC TGCACGGGGA CCAGGACTCG
GTGATCCCGG TGGAGCACGC GCACCGGTTG GCGGCCGTGG CGGGGGAGGG CTCGCGGCTG
GATGTCGTGG CCGGTGTGGA CCACTGCGGG GCGTACTTCG CCGACCGGCC GGGGTACATC
GCGAGGGTGG CGGACTTCCT GCGCAGCGCG TGA
|
|---|
| Protein sequence | MPRRTSLIAL AGTAAMGVTA GALAGARKIS GPQRPPLDYA FTPFEVQVPS EDVTLTASDG
TRLAGWWLDQ PASERVAVVC HGHRGSKADM LGIGPGLWRE GWSVLLFDFR GNGESADGPQ
SLAHYEQRDL EVALDHVAAR RPEAEVDLIG FSMGAAVVLQ VAARDPRVRR VVADSSFADM
RGVIAAAARG MRLPPVPMVQ LVDQATRLRY GYRFAEVQPV EVVADIAPRP LLLLHGDQDS
VIPVEHAHRL AAVAGEGSRL DVVAGVDHCG AYFADRPGYI ARVADFLRSA
|
|---|
| |