Gene Ksed_04350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_04350 
Symbol 
ID8371945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp428381 
End bp429922 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content70% 
IMG OID644990731 
Productamino acid carrier protein 
Protein accessionYP_003148274 
Protein GI256824314 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1115] Na+/alanine symporter 
TIGRFAM ID[TIGR00835] amino acid carrier protein 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACCC AGGCCGAGAA GTCCGGCATC GACGGCGCGA TCGAGTCGTG GTTCGGCCCG 
GTCGTGGAAT GGCTCTCCGG CATCGTCTTC GCCACCTTCC CACTGGGCAG CGCGGAGATG
CCCTTCCTCA TCGTGTGGCT GCTACTCGGC GGGTTCGTGC TGAGCGCCCT CATCGGGCCC
CAGATCGTCT ACGGCATGCG GCAGGTGCCC GGCATCGTGA AGGGCCGGTT CAACCGGCGC
ACCGACCCCG GTGAGATCAC CAGCTACCAG GCGCTGGCCA CCGAGCTCTC GGGCACGGTG
GGGCTGGGCA ACGTCGCCGG TGTGGCCGTG GCCATCACCG TCGGTGGCCC CGGCGCCACG
CTGTGGATCA TCCTCGCCGG CTTCCTCGGC ATGTCCATCA AGGCCGCCGA GGCCACGCTG
GGTGCCAAGT ACCGCCGCAT CAACGACGAC GGCACCGTCT CCGGCGGGCC GATGTACTAC
CTCCAGCACG GCCTGGCCGA GCGCGGCATG CGCCCGCTGG GCGTCTTCCT GGCCGGCTTC
TACGCCTTCG CCATGATGAT CGGCGCGCTG GGGGCCGGCA ACATCTTCCA GGCCAACCAG
GTGGCCGTGC AGCTGACGAA CCTGACCGGC GGCGAGGAGA GCATCCTGGC CGGCCGCGGG
TGGATGATCG GCCTGGCCCT GGCGGTCCTG GCGGCCGTGG TCATCTTCGG CGGCATCCGC
TCCATCGCCC GCTGGACCTC CCGCCTCACG CCGATCATGG CCATCCTGTA CGTGCTGTGC
GTGCTGGTGA TCCTCGGCGC CAACGTCGGC TCCCTGCCCT CGGCCGTCGG GGCGATCTTC
GACGGTGCCT TCACCGGTGA GGGCGTGCAG GGCGGCGTGG TGGGAGTCGC CATCATCGGG
GTGCAGCGCG CGCTGTTCTC CAACGCCGCC GGTGTTGGCT CGGCCGCCAT CGCGCACTCG
CCCGTGCGCA CCCGCCGCCC CGCGCAGGAG GGCCTGGTCG CCTCGCTCGA GCCGTTCATC
GACTCGGTGG TCATCTGCAC GATGACGGCG CTGGCCATCG TCGTGACCGG TCTGCACACC
TCCTCCAGCG CCGATGGGGT GGCCCTCACC TCCGAGGCCT TCGGCACCGT GCACGCCCTG
TTCCCCTGGC TGCTGACGGC GATCGTGCTG CTGCTGGCCT TCTCCACCCT GCTGAGCTAC
TCGTACTACG GCAAGAAGTC CGCCGGGTAC CTTTTCGGCA ACAGCCGGGC CGTGGAGCTG
AGCTACGACG CGCTGTGGAT CGTGATGATC GTGGTCGGTG CCGCCGTCTC GCTGGACACG
GTCGTCGGCT TCTCCGACGC CATGTTCTTC CTGGTGACGT TGCCCAACTT CATCGGCCTG
TACCTGCTCT CCGGCGTGCT GCGCCGCGAA CTCAGCAAGC ACACCCGGGA CTACGCCAAC
GGGGACGTCC CCGAGGTGCC CGAGGCCGAG CGCAGCCAGC CCAACCAGGG CAGCACGGTC
GTCCCCGGCC GGGCAACCGC CACCAACACC CCGGCGCGCT GA
 
Protein sequence
MLTQAEKSGI DGAIESWFGP VVEWLSGIVF ATFPLGSAEM PFLIVWLLLG GFVLSALIGP 
QIVYGMRQVP GIVKGRFNRR TDPGEITSYQ ALATELSGTV GLGNVAGVAV AITVGGPGAT
LWIILAGFLG MSIKAAEATL GAKYRRINDD GTVSGGPMYY LQHGLAERGM RPLGVFLAGF
YAFAMMIGAL GAGNIFQANQ VAVQLTNLTG GEESILAGRG WMIGLALAVL AAVVIFGGIR
SIARWTSRLT PIMAILYVLC VLVILGANVG SLPSAVGAIF DGAFTGEGVQ GGVVGVAIIG
VQRALFSNAA GVGSAAIAHS PVRTRRPAQE GLVASLEPFI DSVVICTMTA LAIVVTGLHT
SSSADGVALT SEAFGTVHAL FPWLLTAIVL LLAFSTLLSY SYYGKKSAGY LFGNSRAVEL
SYDALWIVMI VVGAAVSLDT VVGFSDAMFF LVTLPNFIGL YLLSGVLRRE LSKHTRDYAN
GDVPEVPEAE RSQPNQGSTV VPGRATATNT PAR