| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_04220 |
|---|
| Symbol | |
|---|
| ID | 8371932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 411888 |
|---|
| End bp | 413126 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644990718 |
|---|
| Product | formate-dependent nitrite reductase, membrane component |
|---|
| Protein accession | YP_003148262 |
|---|
| Protein GI | 256824302 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.0739759 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0894023 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCA GCGAGTTCGA CGCTTACTTC CCCCAGGAGT ATGCGGGGCC GCGCCGTCGC
CGCAGCGGTG GCCGGCGGGG CGAGGGCCGT GACGGCGGGG ACGTCCGTGA CGGGTCGGGC
GACCGGTCCG GTCGCGGCAC GGGCGACCCC GGGGGGCGCG GCTCCCGGGC CAGTGACTGG
CTGACCGGCC GGGGCCGCGG GCGCGGGGAG CAGCCGGTGG TGCCGGAGCC GGAGTTCACC
TCCTACTACG GCCACGCGGT GGTCAAGCCC GTGCCGTGGA AGCACGAGAT CTCGATCTAC
CTGTTCACCG GTGGGGTCGC CGGCGGCAGC GGACTGCTGG CGGCCGGTGC CCACGCGGCC
GGTCTGGACG GGTTGCGGCG CAACGCGCGC CTGACGGCCA TCGTGGCCGC CGGGGTGAGC
GGGGTGGCCC TCATCGCGGA CCTGGGGCGG CCCGAGCGCT TCCTGAACAT GCTGCGCACC
GTGAAGCTCA CCTCCCCGAT GTCCGTGGGC ACGTGGATCT TCAGCGGGTA CTCATCCTTC
GCCGGGCTGG CTGCCGCGAT CGAGGCCGAC CGGCTGCTGG GCGGCCGGCC AGCGCCTGCG
CCCCGCGGCG CCTCGCCCAC GTCGGGTGGG CTGCCCGTGC TCGGCCCGGT GCTCCGGCCG
TTCGATGCGG TGGCCAGCGC CGGCCTGGCC CTCTTCTCCG CGCCCTTGGC CGCGTACACG
GCCGTGCTGC TCAGCGACAC CGCGACGCCG GTGTGGTTCG AGAGCCGGCG CCACCTGCCG
TTCGTGTTCG TCTCCTCGGC GGGCATGGCC TCCGGCGGGG TGCAGCAGGT GCTGGCCGGC
ATGCTGGGTG GCGAGAGCCT GGCGGAGGCC GGGCCCGCCC GTCGCCTGGC CGTGGCCGGC
GCCCTCGGGG ACTACCTGGC CGTCGACGCG CTGGAGAAGC AGCTCGACGA GGTCGGCGTG
CTCGAGCCGC TGCACCACGG TGCCGAGGGG CGCAAGATGC GGCTGTCCAA GGCCCTGACC
GTGGCCGGCG GCGTGGTGAC GCTGGTGGCC GGCCGGAGCC GCGCCGGCGC GGTCGTCGGT
GGTCTGGCCC TGGCTGCCGC ATCGGCCCTC ACCCGCTTCG CGGTGGTGGA GGCCGGCATC
GAGTCCGCGA AGGATCCTCG CTGGACCGTG GAGCCGCAGC GTCGCCGCCT CGAGGCCCGT
CGGGCGGCCG GGCAGACCGG CGACTCCATC ACCACCTGA
|
|---|
| Protein sequence | MSTSEFDAYF PQEYAGPRRR RSGGRRGEGR DGGDVRDGSG DRSGRGTGDP GGRGSRASDW
LTGRGRGRGE QPVVPEPEFT SYYGHAVVKP VPWKHEISIY LFTGGVAGGS GLLAAGAHAA
GLDGLRRNAR LTAIVAAGVS GVALIADLGR PERFLNMLRT VKLTSPMSVG TWIFSGYSSF
AGLAAAIEAD RLLGGRPAPA PRGASPTSGG LPVLGPVLRP FDAVASAGLA LFSAPLAAYT
AVLLSDTATP VWFESRRHLP FVFVSSAGMA SGGVQQVLAG MLGGESLAEA GPARRLAVAG
ALGDYLAVDA LEKQLDEVGV LEPLHHGAEG RKMRLSKALT VAGGVVTLVA GRSRAGAVVG
GLALAAASAL TRFAVVEAGI ESAKDPRWTV EPQRRRLEAR RAAGQTGDSI TT
|
|---|
| |