| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_04180 |
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| Symbol | |
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| ID | 8371928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | + |
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| Start bp | 405542 |
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| End bp | 407176 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644990714 |
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| Product | histidine ammonia-lyase |
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| Protein accession | YP_003148258 |
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| Protein GI | 256824298 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0787941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCGA TCGCCAACCC CGCGCCCTCC GTTCCCGAGA CCGTGGTCGT CACGCCCGCC
CCGCTGACGC CCGCCGAGGT CATCGCCGTG GCCCGCCACG ACGCCACCGT GGAGCTGGGC
GACGAGGCGC TGGCCGCCAT CCGCACCGCC CGCGAGCGGG TGGACGCGCT GGCCGACGAC
AGCACGCCCC ACTACGGCAT CTCCACCGGT TTCGGCGCGC TGGCGAACAC CTCCATCCCC
ACCGAGAAGC GCTCCCGGCT GCAGGTGGGC CTCGTGCGCA GCCACGCCGC ATCGAGCGGT
CCGGAGGTGG AGCGGGAGGT CGTGCGCGCC ACCATGCTGC TGCGCCTGCA CACCCTGGCC
ACGGGCCACA CGGGCGTCGC GGAGGAGACC GCCCGCACCT ACGCCGCGCT GCTCAACGCT
GGCATCACCC CCGCCGTGCG CGAGTACGGC TCGCTGGGCT GCTCGGGTGA CCTCGCGCCG
CTGGCGCACT GCGCCCTGGC CGCGATGGGG GAGGGAGAGG TGCACGTGGG CACCGCCGCC
GAGGTGGACG CCTCGGGGGT GGCCTCCACG CCGCTGGTGC GCGCGGGCGA GGCGCTGGCC
GCGGCCGGCA TCGAGCCGGT GGTCCTGCGC GAGAAGGAGG GCCTGGCCCT CATCAACGGC
ACCGACGGCA TGCTCGGCAT GCTCCTCATG GGGCTGGCCG ACCTGCGCCA CCTCTCCCGG
GTGGCCGACC TGACCGCCGC CATGAGCATC GAGGGCCTGC TCGGGACTGA TGCGGTGTTC
GCCCCCGAGC TGCACGCCCT GCGCCCGCAG GCCGGGCAGG CCGACTCGGC GGCCAACCTG
CGCACGCTGC TGGCCGGCTC CGGCATCGTC GCCTCCCACA AGGAGGACTG CTCGCTGGTG
CAGGATGCCT ACTCGCTGCG CTGCACCCCG CAGGTGCTCG GCGGCCTGCG CGACACCCTG
GCCCACGCCG AGCAGGTGGC CGCGGCCGAG CTCGCCAGCG CGGTGGACAA CCCGGCGGTG
CTCGACGACG GCCGGGTGGA GTCCAACGGC AACTTCCACG GCGCGCCGCT GGCCTACGTG
CTCGACTTCC TGGCCATCCC GGCGGCCGAT GCGGCGAGCA TGGCCGAGCG CCGCACCGAC
CGCTTCTGCG ACCCGGCCCG CAACAACGGC CTGAAGGCCT TCCTCGCCGA CGACCCGGGG
ACGGACTCCG GCCACATGAT CGCCCAGTAC ACGCAGGCCG CGATCGTCAG CGAGATGAAG
CGCCTGGCGG TGCCGGCGAG CGTCGACTCC ATCCCGTCCT CGGCGATGCA GGAGGACCAC
GTCTCGATGG GGTGGTCGGC CGCCCGCAAG CTGCGCCGCT CGGTGGACGG GTTGCGCCGG
GTGCTGGCCA TCGAGCTGCT CACCGCCGCC CGCGGCATCG ACCTGCGCTG TGCCGGCGAG
GGCGACCAGG GCGGTGCGGG GGAGGCCCTG ACGCCGTCGC CGGCCACCGG TGCGGTGATC
GCCGCCCTGC GCGAGACGGT GCAGGGCCCC GGTGAGGACC GCTACCTGTC GCCGGAGATC
GAGGCGACCG TCGACCTCAT CGCCTCCGGG CGCGCGCTGG CGGCGGCCGA GGGGGTCACC
GGCCCGCTGC GCTGA
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| Protein sequence | MTPIANPAPS VPETVVVTPA PLTPAEVIAV ARHDATVELG DEALAAIRTA RERVDALADD
STPHYGISTG FGALANTSIP TEKRSRLQVG LVRSHAASSG PEVEREVVRA TMLLRLHTLA
TGHTGVAEET ARTYAALLNA GITPAVREYG SLGCSGDLAP LAHCALAAMG EGEVHVGTAA
EVDASGVAST PLVRAGEALA AAGIEPVVLR EKEGLALING TDGMLGMLLM GLADLRHLSR
VADLTAAMSI EGLLGTDAVF APELHALRPQ AGQADSAANL RTLLAGSGIV ASHKEDCSLV
QDAYSLRCTP QVLGGLRDTL AHAEQVAAAE LASAVDNPAV LDDGRVESNG NFHGAPLAYV
LDFLAIPAAD AASMAERRTD RFCDPARNNG LKAFLADDPG TDSGHMIAQY TQAAIVSEMK
RLAVPASVDS IPSSAMQEDH VSMGWSAARK LRRSVDGLRR VLAIELLTAA RGIDLRCAGE
GDQGGAGEAL TPSPATGAVI AALRETVQGP GEDRYLSPEI EATVDLIASG RALAAAEGVT
GPLR
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