Gene Ksed_03600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_03600 
Symbol 
ID8371870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp346427 
End bp347569 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content70% 
IMG OID644990656 
Productconserved domain protein, TIGR02271+C111 
Protein accessionYP_003148201 
Protein GI256824241 
COG category[S] Function unknown 
COG ID[COG3861] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02271] conserved domain 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.67855 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGCA AGGAGCAGCT GCAGGACCTG CGTGGCGGTG ACCTGTTCGG GACCGACAAC 
GAGAAGATCG GGTCCATCAG CGACATCTAC CTGGACGACC AGACCGGCCA GCCGGCATGG
GCCACGGTGA ACGTGGGCAT GTTCAGCGGC GACAGCTTCG TGCCGCTGGA CGACGCCACC
ATCGCCGACG GTGGCCTTGC CGTTCCCTAC ACCAAGGACA AGGTGAAGGA CGCGCCGCAG
ATCGAGGCCG GCCAGCACCT GGACGCCGAG CACGAGGTGG AGCTGTACCG CTACTACGGC
GTGCAGTTCG ACGGTGACAA CGCCGGCACC GACACCACCG ACACGCTGGA CCGTCAGGAC
GGCCGCGTGG ACGGCGCCCC GGTCGAGGGC CAGGACCGCG GTGAGTTCGG TCGCTGGGAC
AGCGGCGACG CCGCTGCTGC CGGCGCCGGG ACCGCAGGCG TTGCCGGTGC CGCCGGCTAC
GCCGGGCACG ACACCGACAC CGACGCCCGG GCGGACTACG ACCGCCAGTA CGGCGACGAC
ACCGCGCTGG ACGTGGAGCG TGACCGCGCC GCGGCCGCCG ACACCGACCA GCGCGCCGGC
TTCTTCGGCG GCGACCGTGA CGCCGACGCC ACCACCGCCG TGCCGACCGC GGCCGCCGGG
ACGGACTACG ACCGTGACCG CACGGCCGAC TACGACCGTG ACCGCGCGCA GGCCGTCGAC
GGCGAGCGCA CCTCCGTGAC CCGTCACGAG GAGCGCCTCA ATGTCGGCAA GGAGCGTCGC
GAGACCGGCG CCGTCCGCCT CAAGAAGTAC GTGGTCGAGG AGGACGAGAC GATCTCCGTG
CCGCTGGAGC GCGAGTCCAT CGAGGTCGAG CGCCGCGACA TCACCGACGG CCAGGCCATC
GGTGACTGGG ACTTCGGCGA CGACGAGCTG GAGATCACCC TCATCGAGGA GCACCCCGTC
ATCTCCAAGG AGGTGTACGC GGTCGAGGAG ATCGGCCTGA ACAAGAAGGT CGTCACCGAG
AACCGTCAGG TGACCGAGCG TGTCCGCCGC GAGCGCGTGG ACATCGAGGG CCTGGACGAC
AACGCCCAGA CCGGCCGGGA CAACGGCGGC CTCTTCGGCG GCCGCCAGAA CGACCGCATC
TGA
 
Protein sequence
MISKEQLQDL RGGDLFGTDN EKIGSISDIY LDDQTGQPAW ATVNVGMFSG DSFVPLDDAT 
IADGGLAVPY TKDKVKDAPQ IEAGQHLDAE HEVELYRYYG VQFDGDNAGT DTTDTLDRQD
GRVDGAPVEG QDRGEFGRWD SGDAAAAGAG TAGVAGAAGY AGHDTDTDAR ADYDRQYGDD
TALDVERDRA AAADTDQRAG FFGGDRDADA TTAVPTAAAG TDYDRDRTAD YDRDRAQAVD
GERTSVTRHE ERLNVGKERR ETGAVRLKKY VVEEDETISV PLERESIEVE RRDITDGQAI
GDWDFGDDEL EITLIEEHPV ISKEVYAVEE IGLNKKVVTE NRQVTERVRR ERVDIEGLDD
NAQTGRDNGG LFGGRQNDRI