Gene Ksed_02530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_02530 
Symbol 
ID8371765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp252999 
End bp253811 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content73% 
IMG OID644990555 
Producthypothetical protein 
Protein accessionYP_003148101 
Protein GI256824141 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCG ACCCCGCCGC ACCCCCGCCC ACCCGCACCA TCCAGCTGGG CACCAGCGGA 
CAGCAGGCCC GCATCGAGGC GGACGAGTTG GGCGGCCACG AGCTGTTCAT CGGCGGGCAC
GTGCAGTCCC ACGTCGACCT GGCCGACCCC ACGCACGTCC GGTACGAGTA CCTGCGCCGC
ATCGCCACTG TCATCGATGA GGTGACGCCC GCGGGCGCCC CGCTGGCGGT CCTGCACCTG
GGCGCCGGGG CCCTGACCCT GGTGCGCTAC GTGCAGGCGA CGCGACCCGC ATCGGCCCAG
GTGGTGGTGG ACATCGACCG TGAGCTGGTC GACTTCGTGA CCACCACGCT GCCGCTTCCG
GCGGGGACGG ACCTGGAGGT CGTGGTGGGC GACGCCCGGG AGGCCGTGGC CGAGCTGGCT
GGCGAGCGCT TCGACGTGGT GGTGCTGGAC GTGCCGAGCA ACACCCCCGA GACCGACCAC
CTGGCCGGCC CGGACTTCCA CCTCGAACTG CTGGACCTGC TCACCGAACA GGGTGTGCTG
CTGGTCAACG TGGGGGACGA CGACGGGCTG GAGTTCTTTG CCGGACAGGT CCGTTCGCTG
AAGGAGGCCG CTACCACCGA GGGGCACGAC GGCTGCTGGG TGCTGGCCGA TGCGGGCATG
CTCGACCACC TGGCGCTCGG CAACGCGGTA CTTGCCGTGG GGTCGGGCCT GCGGACAGCG
CAGGCCGCGT TGGCCGCCGC GGGGCCGCAC CCGGGCGCAG TGCTCGACCC GGCCGGCGCG
GCGGCACTGG CCGACCGCAT CGAACAGTGC TGA
 
Protein sequence
MPADPAAPPP TRTIQLGTSG QQARIEADEL GGHELFIGGH VQSHVDLADP THVRYEYLRR 
IATVIDEVTP AGAPLAVLHL GAGALTLVRY VQATRPASAQ VVVDIDRELV DFVTTTLPLP
AGTDLEVVVG DAREAVAELA GERFDVVVLD VPSNTPETDH LAGPDFHLEL LDLLTEQGVL
LVNVGDDDGL EFFAGQVRSL KEAATTEGHD GCWVLADAGM LDHLALGNAV LAVGSGLRTA
QAALAAAGPH PGAVLDPAGA AALADRIEQC