Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_02380 |
Symbol | |
ID | 8371750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 237083 |
End bp | 238294 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644990542 |
Product | arabinose efflux permease family protein |
Protein accession | YP_003148088 |
Protein GI | 256824128 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCACAG CCCGCCTGGA GAACTGGGGT ACCCCGTTGA CGCCCGGCGG GCCCACGCTG CGCCAGCTCG CCTTGTCGGC CTACGCGCCG ATGCTGTTGT GGTCGGTCGC GCTGGCCGGG ACGCTGCCGG TGCTGCCCCT CATCGCGATG CGTTTGGGTG CGACAGCGGG GCAGGCCGCC CTCATCGTGG CCCTGCAGGG CGTGGCGGCG ATGGCGGTGG GCATCCCCGC GGGCATGGCC ACCGAGCGCA TCGGGGAGCG CCGCGCGATG ACCGGCGCGG GGGCGTTGAG CGCGTTGGCG ATGCTGCTGG TGCTCACCAC CAGCTCGCTG GCCGTGCTGT CCCTGGGGGT GGTGATGCTG GGCTGCTCGA CGAGCGTGTT CATGCTGGCC CGGCAGAGCT ACCTGACCTC GGCCTTCCCG CGGCGGCAGC TGGCGCGGGC AATGTCGACG CTCGGGGGGA TGGCCCGCAT TGGCTTCTTC GTCGGTCCGA TGCTGGGGGC GCTGGCCATC TGGCAGGTGG GCGTGCGCGG CCCGGTGGCG GTCTCGCTGG CCCTCCTGCT CGTGCTCACC CTCACCACCC TGTGGCTGCC CCGCCTGCCG GGCGAGGCCG CATCGAAGGC CACCCGACCA CCGCCGATGC GGGGCGTCAT CACCGGGCAC TGGCGCACCT TCACCACGCT CGGGGTCGGG GTGGTGCTGT GTGCGGCGGC GCGGGGCTCG CGGACCGTGA TCATGCCGCT GTGGGGGCAC CACATCGGGG TGGACGACAG CGTGATCTCG CTGATCGTGG GACTGGCCGG GCTGCTGGAG ACGCTGACCT TCTACCCGGC CGGGGTGTTG ATGGACCGGG TCTCGCGGCG GGCGAACGCC ATCCCGTCCA TGGCCATCCT GGGGGCCGGC ATCGCGCTGG TGCCGTTGTC CGGCTCGGCG CTGACCCTGG CGCTGGCGGC GGTGGTCATC GGATTCGGCA ACGGGCTGGG CTCGGGGCTG GTGATGACCC TGTCGGGAGA CGTGGCGCCG GAGGTGGGGC GGACCTCCTT CCTCGCGGTG ATGCGCACCC TGGCCGACGG GGGGAACGCC TCGGGCCCGT TGGTGATCTC GGGGGTGACG GTCCTCGGTG GGCTCGGGGC GGCGATCGTC GTGGCGGCGT GCTTCGGGTT CGGGGCGTCG GCGGCGTTCG CCCGGTGGGT GCCCCGGGGG CGGCCGGGCT GA
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Protein sequence | MSTARLENWG TPLTPGGPTL RQLALSAYAP MLLWSVALAG TLPVLPLIAM RLGATAGQAA LIVALQGVAA MAVGIPAGMA TERIGERRAM TGAGALSALA MLLVLTTSSL AVLSLGVVML GCSTSVFMLA RQSYLTSAFP RRQLARAMST LGGMARIGFF VGPMLGALAI WQVGVRGPVA VSLALLLVLT LTTLWLPRLP GEAASKATRP PPMRGVITGH WRTFTTLGVG VVLCAAARGS RTVIMPLWGH HIGVDDSVIS LIVGLAGLLE TLTFYPAGVL MDRVSRRANA IPSMAILGAG IALVPLSGSA LTLALAAVVI GFGNGLGSGL VMTLSGDVAP EVGRTSFLAV MRTLADGGNA SGPLVISGVT VLGGLGAAIV VAACFGFGAS AAFARWVPRG RPG
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