Gene Ksed_02380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_02380 
Symbol 
ID8371750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp237083 
End bp238294 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content74% 
IMG OID644990542 
Productarabinose efflux permease family protein 
Protein accessionYP_003148088 
Protein GI256824128 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCACAG CCCGCCTGGA GAACTGGGGT ACCCCGTTGA CGCCCGGCGG GCCCACGCTG 
CGCCAGCTCG CCTTGTCGGC CTACGCGCCG ATGCTGTTGT GGTCGGTCGC GCTGGCCGGG
ACGCTGCCGG TGCTGCCCCT CATCGCGATG CGTTTGGGTG CGACAGCGGG GCAGGCCGCC
CTCATCGTGG CCCTGCAGGG CGTGGCGGCG ATGGCGGTGG GCATCCCCGC GGGCATGGCC
ACCGAGCGCA TCGGGGAGCG CCGCGCGATG ACCGGCGCGG GGGCGTTGAG CGCGTTGGCG
ATGCTGCTGG TGCTCACCAC CAGCTCGCTG GCCGTGCTGT CCCTGGGGGT GGTGATGCTG
GGCTGCTCGA CGAGCGTGTT CATGCTGGCC CGGCAGAGCT ACCTGACCTC GGCCTTCCCG
CGGCGGCAGC TGGCGCGGGC AATGTCGACG CTCGGGGGGA TGGCCCGCAT TGGCTTCTTC
GTCGGTCCGA TGCTGGGGGC GCTGGCCATC TGGCAGGTGG GCGTGCGCGG CCCGGTGGCG
GTCTCGCTGG CCCTCCTGCT CGTGCTCACC CTCACCACCC TGTGGCTGCC CCGCCTGCCG
GGCGAGGCCG CATCGAAGGC CACCCGACCA CCGCCGATGC GGGGCGTCAT CACCGGGCAC
TGGCGCACCT TCACCACGCT CGGGGTCGGG GTGGTGCTGT GTGCGGCGGC GCGGGGCTCG
CGGACCGTGA TCATGCCGCT GTGGGGGCAC CACATCGGGG TGGACGACAG CGTGATCTCG
CTGATCGTGG GACTGGCCGG GCTGCTGGAG ACGCTGACCT TCTACCCGGC CGGGGTGTTG
ATGGACCGGG TCTCGCGGCG GGCGAACGCC ATCCCGTCCA TGGCCATCCT GGGGGCCGGC
ATCGCGCTGG TGCCGTTGTC CGGCTCGGCG CTGACCCTGG CGCTGGCGGC GGTGGTCATC
GGATTCGGCA ACGGGCTGGG CTCGGGGCTG GTGATGACCC TGTCGGGAGA CGTGGCGCCG
GAGGTGGGGC GGACCTCCTT CCTCGCGGTG ATGCGCACCC TGGCCGACGG GGGGAACGCC
TCGGGCCCGT TGGTGATCTC GGGGGTGACG GTCCTCGGTG GGCTCGGGGC GGCGATCGTC
GTGGCGGCGT GCTTCGGGTT CGGGGCGTCG GCGGCGTTCG CCCGGTGGGT GCCCCGGGGG
CGGCCGGGCT GA
 
Protein sequence
MSTARLENWG TPLTPGGPTL RQLALSAYAP MLLWSVALAG TLPVLPLIAM RLGATAGQAA 
LIVALQGVAA MAVGIPAGMA TERIGERRAM TGAGALSALA MLLVLTTSSL AVLSLGVVML
GCSTSVFMLA RQSYLTSAFP RRQLARAMST LGGMARIGFF VGPMLGALAI WQVGVRGPVA
VSLALLLVLT LTTLWLPRLP GEAASKATRP PPMRGVITGH WRTFTTLGVG VVLCAAARGS
RTVIMPLWGH HIGVDDSVIS LIVGLAGLLE TLTFYPAGVL MDRVSRRANA IPSMAILGAG
IALVPLSGSA LTLALAAVVI GFGNGLGSGL VMTLSGDVAP EVGRTSFLAV MRTLADGGNA
SGPLVISGVT VLGGLGAAIV VAACFGFGAS AAFARWVPRG RPG