Gene Ksed_02300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_02300 
Symbol 
ID8371742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp227593 
End bp228096 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content73% 
IMG OID644990534 
Productprotein-tyrosine-phosphatase 
Protein accessionYP_003148080 
Protein GI256824120 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATCG AATGCGTCTG CTTGGGGAAC ATCTGCCGCT CGCCCGCCGC GGAGGCGGTG 
CTCCGCCGGA AGTTCGCGGA GGCCGGCCTC GATGAGGTGA CGGTCACCTC CGCCGGGACC
GGCGACTGGC ACGTGGGTCA GGACCCGTAC CACCTGAGCA GCCAGGAGGG GGAGCGTCGC
GGCTACACCT TCGAGACGGT GGCCCGGCAG ATCGCGCCTG GTGACTTCGC CGGTGCGGAC
CTGGTGCTGG CCATGGACGA GCAGAACGCC GAGGACCTGC GCGGGCTCGC CCCCACGCCG
CAGGACGCGG CGAAGGTGGT GGCCCTGGGC GCCTTCGCTC CGGGCGCCGA TGCGGCCGAC
CCCGAGCCGG TCCCCGACCC CTACGGGCAG GACGCTGCGG CCTTCACCGC GATGTACGAC
CAGATCGAGC CGGCCTGCGA GGGCCTGGTG GCCGCGGTGC AGGACGGCAG CTGGCGGCAG
GTCGTGGAGC GCGCCGCACG GTGA
 
Protein sequence
MHIECVCLGN ICRSPAAEAV LRRKFAEAGL DEVTVTSAGT GDWHVGQDPY HLSSQEGERR 
GYTFETVARQ IAPGDFAGAD LVLAMDEQNA EDLRGLAPTP QDAAKVVALG AFAPGADAAD
PEPVPDPYGQ DAAAFTAMYD QIEPACEGLV AAVQDGSWRQ VVERAAR