Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_01810 |
Symbol | |
ID | 8371693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 179394 |
End bp | 180764 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644990488 |
Product | predicted transcriptional regulator with HTH domain |
Protein accession | YP_003148034 |
Protein GI | 256824074 |
COG category | [K] Transcription |
COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCGCCG AGCGGATCGC GGCTCTCCTC TCGCGAGGCG AGGACCAGTG GTTCGAGCGG AAGTCCGGTC GCATCGCACC CCGTGATCTC GCCGAGACTC TGGTGGCTCT GGCCAACGCC GAGGGCGGGA CCGTGGCTGT CGGTCTGCAC GCGGGCCAGG TGGACGGTGT GGCGGACGAC CGCGCCAACC CCCTGCGCCA GGCGGCCCAG GACTTCACGG TCCCGGTCGT ACGGGCCGAG GTCGAGGAGT TCCAGGATCC CCAGGGTGCC AGGATCCTGG TCTACCGGGT GGCCCCGTCC CAGCGCGTCC ACGAGACGGC GAAGGGCGAC TGCTTCCTCC GCGTCGGAGA CGAGTCGGTG CGCCTGCGCT TCACCCAGCG GCAGGAGCTC GAGCACGACC GGGGCCCTGA ACCCTTCGAC GGCACACCCA GCGGAGCGGG CCTCGAGGAC CTGGACCCCG CTCAGGTCGA GAGCTACCGA ACCACTCTCG GCGCCTCCAC ACCCGAGGGG CTGCTGCGCG CGCGGAACCT GCTGACCCCT CGCGGGGAGG TCACCGTGGC GGGATACCTC CTCCTCTCGG AGCACCCTCA GGAGCGCTAC CCCAACGCGC ACGTCCGAGT GCTCCGCTAC CTGGAGGACG AACGGGGAAC CGGTGCAGGG CAGTCCCTGG CCGCTGACGG CGACATCCGC TGCGAGGGGC CCCTCCCCCA GCAGATCGAG CAGGCCACGA GGACCATCGC GCAGATGATG CCGGCTCGCC GCGCGCTCAC CGAGAGCGGA CGTTTCGAGG CGCTGCCCCT CATCCCGCGA GACGTGTGGC TCGAGGGTCT GGTCAACGCG GTCGTGCACC GGTCCTACAG TCTCGCGGGT GACCACGTCC GGGTGGAGAT CTTCCCGTCG CGTATGGAGA TCACGAGCCC CGGACGATTC CCCGGCCTCG CCGACCCGAG CGATCCGCAG TCCATCGGCC GGCACGCGAG GAATCCCCGG ATCGCCCGGG TGTGCGCCGA TCTGGGGATC ACCCAGGAGC TGGGCGAGGG CATCCGCCGC ATGTTCGTCG AGATGCGGCG CCGTGGCCTC ACGGATCCGC TCTACACCCA GTCCCCGTCG GCGGTTCGCC TGGTGCTCTC CTCGGCGGAT TCCGTCCCGG AAGCGGTCCG GTCTGCTGTC GGGAAGGGTG CCTTGGCCAC GTTGGACGCG ATGCGGCTCG CGGGTCGGCC GCTGGGGACG GGCCAGGTTG CCGAGCTGAC GGGCCGGAGC CGCCCCACCG TGCTGCGGCA CCTGCACCGT CTCCGTGAGG AGGGCCTCGT GAGCTGGGAG GGCGAGTCCG CCAAGGACCC CCGAGCCCGG TGGGCAGTGC GGGGAGTGTG A
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Protein sequence | MSAERIAALL SRGEDQWFER KSGRIAPRDL AETLVALANA EGGTVAVGLH AGQVDGVADD RANPLRQAAQ DFTVPVVRAE VEEFQDPQGA RILVYRVAPS QRVHETAKGD CFLRVGDESV RLRFTQRQEL EHDRGPEPFD GTPSGAGLED LDPAQVESYR TTLGASTPEG LLRARNLLTP RGEVTVAGYL LLSEHPQERY PNAHVRVLRY LEDERGTGAG QSLAADGDIR CEGPLPQQIE QATRTIAQMM PARRALTESG RFEALPLIPR DVWLEGLVNA VVHRSYSLAG DHVRVEIFPS RMEITSPGRF PGLADPSDPQ SIGRHARNPR IARVCADLGI TQELGEGIRR MFVEMRRRGL TDPLYTQSPS AVRLVLSSAD SVPEAVRSAV GKGALATLDA MRLAGRPLGT GQVAELTGRS RPTVLRHLHR LREEGLVSWE GESAKDPRAR WAVRGV
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