Gene Ksed_01280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_01280 
Symbol 
ID8371641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp133137 
End bp134729 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content71% 
IMG OID644990438 
ProductABC-type multidrug transport system, ATPase and permease component 
Protein accessionYP_003147984 
Protein GI256824024 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGTG GTGACAGGTC CACCGGTCGT GTCTGCAAGG TCTTCTCGGG CCCTGTGCGC 
TGGCGGCTGG TTGCGGCGGT CTGTGCCCTG GCGGTGGCCA GCGTCGTGCA CATGGTCCTG
CCGTGGTTCC TCGGGCGGAT CGTCGACGAG GGTCTGCTGG CCGGCGACCG TGGCGCGCTG
ATCGGGTGGT CCGTGGGCCT GTTCGGGGTC TCTCTGCTGA ACCCCTTGTT CTATGTCATG
GGGTATCGGC AGATGGGTTT GGCGGAAGCC GAGGTCGAGC GCCGCCTGGC CGAGGAGCTG
GCGTCTGCTC TGACTGTCAG CCGGCGGCCG GGGAGGGTGA GCCGTGCCCC GGGGGACGTC
GTCACCCTGC TGTCCACCGA CGGCCGGGAC GTGGCTGCCC TGTGTTCCAC CGTCGGCCAT
GGGGTGATGA ATGTCGTGGC GTTCACGCTG GGCACCGTCA TGGTGTGGCG GATCGACCCG
GTGCTGGGGG GAGTCCTCCT CGTCGGGGTC GTGGCTGCCA CGGGGATCGC GGGCCCGCTC
CTGGGGCGGC TGACGGGGCA TCAGCAGGGG TACCGCAGCG AGCTGGCCGA GCTGGGACGG
CAGGCGAACG ACTTGGTCAG CGGGCTGCGA GTCCTGCGCG GCATCGGGGG TGAGGGACAG
TTCCTGGCCC GCTACACCGC ACAGTCCAAG AGCCTGCGTG GGGCGGCCCA TCGGATGACG
GTCTCCGGCA CGTGGGTCCA GGCCCTGCAG CAGGCGGTCC CCCTGGCGTA TCTGGCGGTC
ATCACCTGGG TGGGAGCCCG CTTGGCGGTG GCCGGTTCGA TCTCGGTCGG AGACCTGAGT
GCGGCCTTCG GCTACGCCAC CGGCCTGCTC ATGTACTCGG GGTCCCTGTT GGGCAACGCC
CAACAGCTGG TGGCAGCACG GGTGGGGGCT TCGCGCCTTG CCCACGCGCT GGCACCTCGA
ACCCCGGACG GGCCGGAGGC CCCCGCCGGA CACGACAGGT CGTCGGCCGT GGATGTCGTG
CTCGCAGATC TGCCGGTGTC ACAGGGCATG CTGACGGTCG TCGTCACGGA TCACCCGGCC
GGGGTCTCCG GCATCTTCCA CCACATCGCC CGGAGCCCGT ATGAGGCGAG TCGTCTCCTC
GCCGGTCACG GTGATGTCGC ACCCCTGAGG GTGCTCGTGG TGGACGACGG GGACCACCTG
TTCGCCGGGT CGCTGCGGGA CGTCGTGAAC ACACCCGACG ACACTGCCGC ACAGCGCGCC
CTCAGCGTGG CTTGTGCTGA GGACGTGGTC GTACGCGGGG GCGCGGGTCT GGACGGATGG
GTGGCCGAGG GGGGACGCAA CCTGTCGGGA GGGCAGCGTC AGCGTCTCGC CCTCGCCCGG
GCGGTGGCGG CAGATCCGGA CGTGCTGCTG GCCGTCGATC CGACGGTGGC GCTGGATGCC
GTCACCGAGG CGGAGGTGGC ACGACGACTG GCCCGGTGCC GACGGGGCAG GACCACCGTC
GTGGTCAGCC CGTCGACGGT GTGGCGCAGG CACGCGGATC GCGTGGTCGA GTGGGGACCG
CTGCCCGCGA CCAAGAGGGG GGAGGCCCGG TGA
 
Protein sequence
MSGGDRSTGR VCKVFSGPVR WRLVAAVCAL AVASVVHMVL PWFLGRIVDE GLLAGDRGAL 
IGWSVGLFGV SLLNPLFYVM GYRQMGLAEA EVERRLAEEL ASALTVSRRP GRVSRAPGDV
VTLLSTDGRD VAALCSTVGH GVMNVVAFTL GTVMVWRIDP VLGGVLLVGV VAATGIAGPL
LGRLTGHQQG YRSELAELGR QANDLVSGLR VLRGIGGEGQ FLARYTAQSK SLRGAAHRMT
VSGTWVQALQ QAVPLAYLAV ITWVGARLAV AGSISVGDLS AAFGYATGLL MYSGSLLGNA
QQLVAARVGA SRLAHALAPR TPDGPEAPAG HDRSSAVDVV LADLPVSQGM LTVVVTDHPA
GVSGIFHHIA RSPYEASRLL AGHGDVAPLR VLVVDDGDHL FAGSLRDVVN TPDDTAAQRA
LSVACAEDVV VRGGAGLDGW VAEGGRNLSG GQRQRLALAR AVAADPDVLL AVDPTVALDA
VTEAEVARRL ARCRRGRTTV VVSPSTVWRR HADRVVEWGP LPATKRGEAR