Gene Ksed_01080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_01080 
Symbol 
ID8371621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp112374 
End bp114326 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content72% 
IMG OID644990419 
Productacetyl-coenzyme A synthetase 
Protein accessionYP_003147965 
Protein GI256824005 
COG category[I] Lipid transport and metabolism 
COG ID[COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 
TIGRFAM ID[TIGR02188] acetate--CoA ligase 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCCG AGAACGACGC TGCTGCCGTC CGCACCTACC CGCCGGCGGC CGAGTTCGCC 
GCACAGGCCA ACGCGACGGC CGAGCTGGCC GAGCGCGCCG GCGCGGACCG CGAGGCGTTC
TGGGCGGAGC AGTCCCGCGA GCTCCTGCCG TGGGCCACGG ACTTCTCCGA GGTGCTGGAC
TGGTCCGAGG CCCCCTTCGC CCGCTGGTTC GCCGACGGGG AGATCAACGC CTCCTACGCC
TGCCTCGACC AGCACGTCGA GGCCGGCCGT GGCGACGAGG TCGCCATCCA CTGGGTGGGT
GAGCCGGAGG GCGACCGCCG CGACCTGACC TGGAGCGACC TGCTCGAGGA GACCTGCCGC
GCGGCCAACG TACTGGAGGA CTTGGGCGTC CAGGCCGGGG ACCGGGTGGC GATCTACCTG
CCGATGATCC CCGAGACGGT CGTGGCGATG CTTGCGTGCG CCCGCATCGG CGCCACCCAC
TCGGTCATCT TCGGCGGGTT CGCGCCCAAC GCCATCCGGG CCCGCGTGCA GGACGCCGAG
GCCAAGGTGG TCATCACCGC CGACGGCGGC TACCGCAAGG GCAAGGCGAG CGCCCTGAAA
GCCAACGTGG ACGAGGCCCT CAGCCACGAG GACACCACCG TGTCCACGGT GCTGGTGGTG
CGCCGCACCG GCCAGGACGT GGGCTGGCAG GACGGCCGCG ACCAGTGGTG GCACGAGGCC
ATGGAGACGG CCTCGTCGGA CCACGAGGCC CAGCCGATGC CGGCCGAGCA CCCGTTGTTC
ATCCTCTACA CCTCCGGCAC CACGGGGACA CCCAAGGGCA TCTTCCACAC CACCGGCGGG
TACCTGACGC AGACGGCGTA CACGGCCAAG ATGGTGCTTG ACCTGGAGCC CGGCCGGGAC
GTGTACTGGT GCACCGCCGA CGTCGGCTGG GTCACCGGGC ACTCCTACCT CGTCTACGGC
CCGATGGCGC TGGGCGTCAC CCAGGTGATG TACGAGGGCA CGCCTGACAC CCCCCACAAG
GGCCGGTGGT GGGAGATCGT CCAGGAGTAC GGCGTCACCG TCCTCTACAC GGCTCCCACC
GCCATCCGCG CGGCGATGAA GTGGGGCGAC GACATCCCCG CGCAGTACGA CCTCTCCTCG
CTGCGCCTGC TGGGTAGCGT GGGTGAGCCC ATCAACCCCG AGGCCTGGGC CTGGTACCGG
GAGCACATCG GTGGCGGGCG CACCCCCATC GTGGACACGT GGTGGCAGAC CGAGACGGGC
GCGATGATGA TCGCCCCCCT GCCGGGCGTG ACCGAGCTGG TGCCCGGGTC CGCGCAGACG
CCGGTGCCCG GCATCACGGT GGACGTGGTG GGCGAGTCCG GCCAGTCGGT GGGCAACGGG
GAGAGCGGCT ACCTGGTGAT CCGGGACCCG TGGCCGGCCA TGCTGCGCGG CGTCTGGGGC
GATCCGCAGC GCTTCCGCGA CACGTACTGG TCGCGCTTCG AGGGCATGTA CTTCGCCGGG
GACGGGGCCA AGCGGGACGA GGACGGCAAC GTCTGGGTGC TGGGCCGCGT GGACGACGTC
ATGAACGTCT CCGGGCACCG CCTGAGCACC TCGGAGATCG AGTCCGCCCT GGTCAGCCAC
GATGCGGTCG CCGAGGCCGC GGTGGTCGGC GCGACCGACG CCTCCACCGG CCAGGCGGTG
GTGGCCTACG TGATCCTGCG CGGGGACGCC GCCGAGGCGC GCGGTGAGGG CGATGACGAC
GCCGAGCTGG TGGCCGAGCT GCGGGCCCAC GTGGGCAAGG AGATCGGCCC GATCGCGCGC
CCGCGCGACA TCACCGTGGT ACCGGAGCTG CCGAAGACGC GGTCTGGCAA GATCATGCGT
CGACTGCTGC GGGACCTCGC CGAGGGCAAG GAGGTCGGTG ACGTCTCGAC GCTGGCCGAC
CCCTCGGTGA TGGACTCCAT CCGTCGTCCC TGA
 
Protein sequence
MTPENDAAAV RTYPPAAEFA AQANATAELA ERAGADREAF WAEQSRELLP WATDFSEVLD 
WSEAPFARWF ADGEINASYA CLDQHVEAGR GDEVAIHWVG EPEGDRRDLT WSDLLEETCR
AANVLEDLGV QAGDRVAIYL PMIPETVVAM LACARIGATH SVIFGGFAPN AIRARVQDAE
AKVVITADGG YRKGKASALK ANVDEALSHE DTTVSTVLVV RRTGQDVGWQ DGRDQWWHEA
METASSDHEA QPMPAEHPLF ILYTSGTTGT PKGIFHTTGG YLTQTAYTAK MVLDLEPGRD
VYWCTADVGW VTGHSYLVYG PMALGVTQVM YEGTPDTPHK GRWWEIVQEY GVTVLYTAPT
AIRAAMKWGD DIPAQYDLSS LRLLGSVGEP INPEAWAWYR EHIGGGRTPI VDTWWQTETG
AMMIAPLPGV TELVPGSAQT PVPGITVDVV GESGQSVGNG ESGYLVIRDP WPAMLRGVWG
DPQRFRDTYW SRFEGMYFAG DGAKRDEDGN VWVLGRVDDV MNVSGHRLST SEIESALVSH
DAVAEAAVVG ATDASTGQAV VAYVILRGDA AEARGEGDDD AELVAELRAH VGKEIGPIAR
PRDITVVPEL PKTRSGKIMR RLLRDLAEGK EVGDVSTLAD PSVMDSIRRP