Gene Ksed_01010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_01010 
Symbol 
ID8371614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp103566 
End bp104333 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content70% 
IMG OID644990412 
ProductABC-type multidrug transport system, permease component 
Protein accessionYP_003147958 
Protein GI256823998 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACCC CCACCGGAAT GCTCTTCTCC CCCACCTACC TCCGCATCGA CACCGTCCGG 
ATCCTGCGGA ACGTCTCCAA CGTCATCTTC ACCATCGGCC TGCCGGTGTT CATGTACCTG
ATCTTCTCGG CCGGCAACGC CATCGACGCC GAGATGCCCG GCGGCGACGG CAACTCGATG
CTGGCCGTGC GCATGGCCGT CTACGGCGCC TGCACGGCGT GTGCCTCCAT CGGCGCCCTG
ACGGCCTGGG AGCGTCAGCA GGGCTGGACC CGCCAGCTGC TGCTCACCCC GTTGAGCCCG
CTCGGGTTCG CCCTGCAGAA GCTCGTCACG GCCCTGGTGG TGGCACTGGT GCCCGTGGTC
CTGGTGCTGG CCATCGCGGC CGCGACCGGC GCCGAGGCAC CGCTGGGCAA CTGGCTGCTG
TGCGGCCTCA TCGGCTGGCT GGGCGCGTCG CTCTTCGCGC TGTACGGCCT GCTGCTGGCG
CTGGTGATCC GCTCCGATGC CTCCATCGGC ATCGCGTCGG GCGGCATCGT GATCCTGGCC
TTCCTGGGCA ACGTGTTCAT GCCGCTGGAC GGCTGGCTGC TCACGCTGGC GCGGTTCACC
CCGATGTTCG GCGTGGTCAA CGCGGCCGAG CGCCCCATCA CCGAGGGGTG GATCAGCAGC
GGGGTGAACA TCCCCGTCTG GCAGGCATGG GCGAACATGG GGGCATGGTT CCTGGTCCTG
GCGGTGGCGT GCACCCTGGT GATGCGGCGC ACGGGGCGGC GCGAGTGA
 
Protein sequence
MSTPTGMLFS PTYLRIDTVR ILRNVSNVIF TIGLPVFMYL IFSAGNAIDA EMPGGDGNSM 
LAVRMAVYGA CTACASIGAL TAWERQQGWT RQLLLTPLSP LGFALQKLVT ALVVALVPVV
LVLAIAAATG AEAPLGNWLL CGLIGWLGAS LFALYGLLLA LVIRSDASIG IASGGIVILA
FLGNVFMPLD GWLLTLARFT PMFGVVNAAE RPITEGWISS GVNIPVWQAW ANMGAWFLVL
AVACTLVMRR TGRRE