Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_28300 |
Symbol | |
ID | 8396718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 3135207 |
End bp | 3136304 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644987569 |
Product | hypothetical protein |
Protein accession | YP_003145169 |
Protein GI | 257065497 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.197043 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAA AGAACCGTCC GTCGTCCATC GACAAAGCCC AAGCGCATCC GTACCCGGAT ATGAGCTACC GGGAAGCAGA AGGCATACCC AATATTGAGC CGCTGTTCAA CGATGCTTTC ATTCGGATAT TCGGGCGAGA AGAATCCCGC GGTATCACGC GCAGTCTCAT TAATGCCGTG CTTTCGCACG CAAACATTGA ACCGATCGAC GAAATCGTAT CAATCGAAGC CGAGCACACC TCGTTGGAAG GCAGCATCAA CTGCAAAGCC CCGCGTATGG ATGTAAGAAT CATCGCGACG AACCGCAGGG TCATCGACTT CGAGGCGCAA TGTTATCCCG AAGACATCGA AAACCGATCG CTGTTATATG CGTCGCAGCT CATGTCCGCA AATACTATGC GTGGTACCAA ATTCAAGGAT ATTCCCCAGG TCATCGTCAT CACCCTCCTC GACGACGCTG CGCTGTTCCC GGATACCTCC GAATATGTGA GCACATGCCA ACTTGGCTGG CACAACGATG GCAAACAGAT CCAGGCAACG GACAGGATGC TGTTCGTGCT CGTTGAACTC GAGAAAGTGC GCAAGCGGTA TAATCTGCTT GATGATGAGG TTCTCGGCGA CGAGCTGCTC TCGTGGCTGT ACCTCCTCAC ATCAGGGTTC AACAAATCCG AGGAGGCGAG TGCCATCATG GATGCATTCC CCGATATCGA AGAGTTCGCG AAAATGTACG GCTATGCGCT CAACGACCCC AAGGTTGTCC GGGCTTATGC CGATTTCGAG TCTGCCGAAC GCGAATACCA GTCTCGCAAG GACTATTTCG AGCGAGTCGA ACGCGAAGCA AAAGAGCGCG GCTTCAAGCA GGGTCAAGAA GAAGGGCTCG AAATAGGAAT CGAGCAAGGG CTTCAACAAG GTCTTGAGCA AGGTCTTCAG CAAGGTCTTC AGCAAGGTCT TCAGCAAGGT CTTCAGCAAG GTCTTCAGCA AGGCCTTCAG CGGGGACTTG AACAGGGGCT TGAGCAGAGC ATCGCAGCGC TCCGGGCCGT CGGCATGGAC GAAGCCGCTG ACCTGCTGGA ACATCAGGCT GGTACGAACA GGGCCTAG
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Protein sequence | MSEKNRPSSI DKAQAHPYPD MSYREAEGIP NIEPLFNDAF IRIFGREESR GITRSLINAV LSHANIEPID EIVSIEAEHT SLEGSINCKA PRMDVRIIAT NRRVIDFEAQ CYPEDIENRS LLYASQLMSA NTMRGTKFKD IPQVIVITLL DDAALFPDTS EYVSTCQLGW HNDGKQIQAT DRMLFVLVEL EKVRKRYNLL DDEVLGDELL SWLYLLTSGF NKSEEASAIM DAFPDIEEFA KMYGYALNDP KVVRAYADFE SAEREYQSRK DYFERVEREA KERGFKQGQE EGLEIGIEQG LQQGLEQGLQ QGLQQGLQQG LQQGLQQGLQ RGLEQGLEQS IAALRAVGMD EAADLLEHQA GTNRA
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