Gene Shel_28300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_28300 
Symbol 
ID8396718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp3135207 
End bp3136304 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content54% 
IMG OID644987569 
Producthypothetical protein 
Protein accessionYP_003145169 
Protein GI257065497 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.197043 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAA AGAACCGTCC GTCGTCCATC GACAAAGCCC AAGCGCATCC GTACCCGGAT 
ATGAGCTACC GGGAAGCAGA AGGCATACCC AATATTGAGC CGCTGTTCAA CGATGCTTTC
ATTCGGATAT TCGGGCGAGA AGAATCCCGC GGTATCACGC GCAGTCTCAT TAATGCCGTG
CTTTCGCACG CAAACATTGA ACCGATCGAC GAAATCGTAT CAATCGAAGC CGAGCACACC
TCGTTGGAAG GCAGCATCAA CTGCAAAGCC CCGCGTATGG ATGTAAGAAT CATCGCGACG
AACCGCAGGG TCATCGACTT CGAGGCGCAA TGTTATCCCG AAGACATCGA AAACCGATCG
CTGTTATATG CGTCGCAGCT CATGTCCGCA AATACTATGC GTGGTACCAA ATTCAAGGAT
ATTCCCCAGG TCATCGTCAT CACCCTCCTC GACGACGCTG CGCTGTTCCC GGATACCTCC
GAATATGTGA GCACATGCCA ACTTGGCTGG CACAACGATG GCAAACAGAT CCAGGCAACG
GACAGGATGC TGTTCGTGCT CGTTGAACTC GAGAAAGTGC GCAAGCGGTA TAATCTGCTT
GATGATGAGG TTCTCGGCGA CGAGCTGCTC TCGTGGCTGT ACCTCCTCAC ATCAGGGTTC
AACAAATCCG AGGAGGCGAG TGCCATCATG GATGCATTCC CCGATATCGA AGAGTTCGCG
AAAATGTACG GCTATGCGCT CAACGACCCC AAGGTTGTCC GGGCTTATGC CGATTTCGAG
TCTGCCGAAC GCGAATACCA GTCTCGCAAG GACTATTTCG AGCGAGTCGA ACGCGAAGCA
AAAGAGCGCG GCTTCAAGCA GGGTCAAGAA GAAGGGCTCG AAATAGGAAT CGAGCAAGGG
CTTCAACAAG GTCTTGAGCA AGGTCTTCAG CAAGGTCTTC AGCAAGGTCT TCAGCAAGGT
CTTCAGCAAG GTCTTCAGCA AGGCCTTCAG CGGGGACTTG AACAGGGGCT TGAGCAGAGC
ATCGCAGCGC TCCGGGCCGT CGGCATGGAC GAAGCCGCTG ACCTGCTGGA ACATCAGGCT
GGTACGAACA GGGCCTAG
 
Protein sequence
MSEKNRPSSI DKAQAHPYPD MSYREAEGIP NIEPLFNDAF IRIFGREESR GITRSLINAV 
LSHANIEPID EIVSIEAEHT SLEGSINCKA PRMDVRIIAT NRRVIDFEAQ CYPEDIENRS
LLYASQLMSA NTMRGTKFKD IPQVIVITLL DDAALFPDTS EYVSTCQLGW HNDGKQIQAT
DRMLFVLVEL EKVRKRYNLL DDEVLGDELL SWLYLLTSGF NKSEEASAIM DAFPDIEEFA
KMYGYALNDP KVVRAYADFE SAEREYQSRK DYFERVEREA KERGFKQGQE EGLEIGIEQG
LQQGLEQGLQ QGLQQGLQQG LQQGLQQGLQ RGLEQGLEQS IAALRAVGMD EAADLLEHQA
GTNRA