Gene Shel_28130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_28130 
Symbol 
ID8396701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp3117470 
End bp3118336 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content60% 
IMG OID644987552 
Productphosphate ABC transporter membrane protein 
Protein accessionYP_003145152 
Protein GI257065480 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0573] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR02138] phosphate ABC transporter, permease protein PstC 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGCAAT TGAACAAACC AATCGAAGCG ATATTCCACG GCGTCTTCCT CATGTGCGGT 
CTTCTCTCGG TGGTCTTCGT GTTCGGAATC ACCGCGTACC TGATCATCTC CGGCCTGCCA
GCCATTGCAG AAATCGGTCC CGTCGATTTC CTGCTCGGGC AGCTGTGGAG TCCTTCCCAA
GGTCAGTTCG GCATTTTGCC GTTCATCCTT ACCAGCCTGT ACGGCACCGT CGGGGCCATC
ACCATCGGCA TTCCCCTGGG ACTGCTGGCG GCGCTGTTCC TCTCGAAATT CGCCGGACCC
AAGGCAAGCC GCGTCATGCG CTCCGCCGTG GAGCTGCTGG CGGGCATCCC TTCGGTCGTC
TACGGTCTTG TGGGCATGAT CGTGCTCGTC CCGGCCATCC AGAAGATCTT CAGCCTCAGT
TCCGGCGCCA CGCTGCTGGC AGCCATCGTG GTTCTGGCGA TCATGATTCT CCCGTACATC
ATCAACGTCT CCGCCACTGC CCTTGATGCG GTGCCTCCGG AGTACGAAGA AGGTTCCTTG
GCGCTGGGCG CGACCGAAAC GGAGACCTAT TTCAAGGTGT CCCTCCACAC CGCCCGCAGC
GGCATCGCCG CCGCCGTCGT CCAGGGAATC GGCCGTGCGT TAGGCGAGGC AATGGCCATC
ATCATGGTCG CGGGCAATGT AGCCAACATG CCGCACCTGT TCGGGTCGGT GCGATTCTTG
ACCACCGCCA TCGTGAGCGA AATGTCCTAC GCCTCATACG GCAGCCTCCA TCGCGACGCG
CTGTTCTCCA TCGGCCTGGT CCTGTTCGTC CTGATCGTGT TCATCAACAT TCTGCTCAAC
GTCATCGTCC GAAAGGAGGA GAAGTAA
 
Protein sequence
MKQLNKPIEA IFHGVFLMCG LLSVVFVFGI TAYLIISGLP AIAEIGPVDF LLGQLWSPSQ 
GQFGILPFIL TSLYGTVGAI TIGIPLGLLA ALFLSKFAGP KASRVMRSAV ELLAGIPSVV
YGLVGMIVLV PAIQKIFSLS SGATLLAAIV VLAIMILPYI INVSATALDA VPPEYEEGSL
ALGATETETY FKVSLHTARS GIAAAVVQGI GRALGEAMAI IMVAGNVANM PHLFGSVRFL
TTAIVSEMSY ASYGSLHRDA LFSIGLVLFV LIVFINILLN VIVRKEEK