Gene Shel_27480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_27480 
Symbol 
ID8396636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp3041855 
End bp3043093 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content61% 
IMG OID644987490 
Productphenylacetate-CoA ligase 
Protein accessionYP_003145095 
Protein GI257065423 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCA TGCCCGAGCA GCTCGAGATG ATTACCGAGC AGTTCAAAAC GCTGAAAGAT 
CGTTCGCCGT TCTACGCTAA GAAGTTCGAC GGCATCGATT TGGCCGCCAT CAAAACGCAA
GAGGAATTCG AAACCCTGCC GTTTACGGAC AAGGGCGACT TGCGTGAGGC CTATCCGCTG
GGACTGACCG CCGTTCCCAT GGAGAAGATC GTGCGTATCC ACAGCTCTTC GGGCACCACG
GGCACGCCGG TCATCGTGCC CTACACCAAG AAGGACGTCG AGGATTGGGC TGTCCAGTTC
GCCCGCTGCT ACGAATACGC AGGCGTCACG CCCGCCGACC GCGTGCAGAT TACGCCAGGT
TACGGTCTGT GGACCGCAGG CATCGGCTTC CAGGCGGGTG CCGAGCTTCT GGGCGCGATG
GCCGTGCCCA TGGGTCCGGG CAACACCGAG AAGCAGATTC AGTTCATGAT GGATATGGAA
ACCACGGTGC TGACCGCCAC CGCCAGCTAC GCCCTGCTGC TCGCCGAGGA AATCGAGAAG
CGCGGCATCC AGGATAAGAT CAAGCTCAAG AAGCTCATCA CCGGTTCCGA GCGCGCCGGC
GAGAAGATTC GCAACCGTAT CATCGAGGCG CTGGGTGTGG AGTACTACGA CATCTACGGC
CTGACCGAGG TGTACGGCCC CGGCATCGGC ATCAGCTGCC AGCACAGCCA CGGCATGCAC
GTGTGGAGCG ACTACGTGTA TCTGGAGATC ATCGACCCCG ATACCGGAAA GGTCCTGCCC
GATGGCGAGT GGGGCGAAAT CGTCCTGACC ACGCTGCAGA AAGAGGGCGC GCCGCTGATC
CGCTTCCGCA CCCACGACCT GTCGCGCATC ATCCCCGGCG AGTGCGCCTG CGGCCACAAC
GAGCATCCGC GCATCGACAC CATTACGGGC CGTTCCGACG ACATGATGAA GATTCACGGC
GTCAACGTGT TCCCGGCGCA GATCGAAGAG ATTCTGGCCA CCTTCCCCGA GCTGTCCAGC
GAGTACCAGA TTCGCCTGTC GCACCTGGAC GGCCGCGACA CCATGCGCAT CTACGTCGAG
ACCAACGGCA GCGTGGACTG GGAAGACCTG CGTAAGCGCG TGGCAAGCAG CGTCAAGGCG
AAGATCGGCT TCACGCCGCT GGTCAAGATC GTCGAGCTGG GCCTTCTGCC TCGCAGCGAG
AAGAAGACCA AGCGCGTGTT CGACGAGCGT TACGACTAG
 
Protein sequence
MNIMPEQLEM ITEQFKTLKD RSPFYAKKFD GIDLAAIKTQ EEFETLPFTD KGDLREAYPL 
GLTAVPMEKI VRIHSSSGTT GTPVIVPYTK KDVEDWAVQF ARCYEYAGVT PADRVQITPG
YGLWTAGIGF QAGAELLGAM AVPMGPGNTE KQIQFMMDME TTVLTATASY ALLLAEEIEK
RGIQDKIKLK KLITGSERAG EKIRNRIIEA LGVEYYDIYG LTEVYGPGIG ISCQHSHGMH
VWSDYVYLEI IDPDTGKVLP DGEWGEIVLT TLQKEGAPLI RFRTHDLSRI IPGECACGHN
EHPRIDTITG RSDDMMKIHG VNVFPAQIEE ILATFPELSS EYQIRLSHLD GRDTMRIYVE
TNGSVDWEDL RKRVASSVKA KIGFTPLVKI VELGLLPRSE KKTKRVFDER YD