Gene Shel_27400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_27400 
Symbol 
ID8396628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp3033542 
End bp3034276 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content60% 
IMG OID644987482 
Productuncharacterized component of anaerobic dehydrogenase 
Protein accessionYP_003145087 
Protein GI257065415 
COG category[R] General function prediction only 
COG ID[COG3381] Uncharacterized component of anaerobic dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAT CGTCCGAACT CGCCCAGATT CTGCAGGGCC GCATGGCCAC CTACCAATTC 
CTCTCCCGCA TGTTCCGCGT AGAGGTGGAC GACAAGCTGT ACCATATCCT TCTGAGCATG
CGTTTTCCCG CCCATACCGG CAACGACAAG GTAGACGAGG GCTATAGGCT CATCGCTTCG
TACCTGAGCA GCACCGCCGA CAACGTGCTG CTGGACCTGG CCCGCGACTA TGTACGCACC
TTCATCGGAT CAGGCAACAG CGGATTCTCC GCAGCCTATC CGTACGAGTC GGTGTACACC
AGCCCGAAGC GCCTGATGAT GCAGGACGCC CGTGACGAGG TGCTGATTCT GTACCGCGCC
GCCGGTCTGG GCAAGAAGGA AAGCTGGAAA GAAGGCGAAG ATCACATCGC CCTGGAGCTC
GAATTCGAGC AGATTCTGGC CCAGCGTTCC CTGGAGGCTC TCGAGGCCGG CGACACGGAC
GCTTGCCTGA AGCTTCTGCT GCAGCAGCGC AATTTCTTGA CCGACCACCT GACCAATTGG
TTCCCCATGA TGGCCGAAGA CATCGCGAAG TTCTCCCAGA CCGACCTGTA CCGCGGCTTG
GGCAAGCTGA CCAGCGGCTG GCTGGAGAAC GACCTGGAGT TCCTCGAGTC CATTCTCGAA
GAGAACGGCA TGCTTGAAGA TGCACCCGAA CGCATTACGG CGCAACTTCC CGCCATCGAG
GAGGTCGGTG CATGA
 
Protein sequence
MTASSELAQI LQGRMATYQF LSRMFRVEVD DKLYHILLSM RFPAHTGNDK VDEGYRLIAS 
YLSSTADNVL LDLARDYVRT FIGSGNSGFS AAYPYESVYT SPKRLMMQDA RDEVLILYRA
AGLGKKESWK EGEDHIALEL EFEQILAQRS LEALEAGDTD ACLKLLLQQR NFLTDHLTNW
FPMMAEDIAK FSQTDLYRGL GKLTSGWLEN DLEFLESILE ENGMLEDAPE RITAQLPAIE
EVGA