Gene Shel_27330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_27330 
Symbol 
ID8396621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp3023886 
End bp3024752 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content58% 
IMG OID644987475 
Producthypothetical protein 
Protein accessionYP_003145080 
Protein GI257065408 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACGC AATGGCCCTT GGTCATCTTC ACCCTGTTTG TTTGCGTGAC CAGCGGTACG 
CTCGGTATGC TGTCCATCTT CGCCCTGAAG GATAAGGCCG AGAAGATCCA GATGCCCGCA
GTTATTCTGG CCGCGGTTTC GCTGGTCGTC GGCGGTGTCG GGTCCTTCAC ACACCTGCAG
CATTGGGAGC GCATCTTCAA CGGCTTCGGC CACATTACTT CAGGCATTAC CCAAGAGCTT
ATAGGCTGCG TGGTGCTGGC GGTGCTCATC GTCATCTGGT TCGTCATGAT TCGCGGCCAG
AAGACCAACA AGGCTCTGGC CTGGGTAACC CTTATTGCCT CAATCGCCAT GGTGGCTGCT
ACTGCCCACT CCTATTGGAT GGCCGGTCGT CCGGCTTGGG GCGTGGGTCT GGAATTCTTC
TACCTAGGCA ACGCCTGTCT GCTGGGCCCC GTGGTCCTGT GGGCCCTGAC CGCAGTCAAG
GCTGACAACC AGTGTCTGGC CGACAGCATC AACTTCACGT TCGTCGGCGG CATCATCGCT
CTCGTGACCG AAGTGATCTT CATCGCCCTG GCTGCTGGTA CGAAGTTTAC AGATGTGGGG
CATTATCTGA ATCCCACGCT CATGACCACC GCTCCAACCC ACATCGACAA TGTTGCATCC
ATCGCCCTGA CGGGTGCCGG CGCTCCGCTG TTCTGGCTCT CCCTGGTCTG TGCCGCCGCG
ACAGCCGTAT GCGCCTTCAT GGCGAAGAAG AACCCTGAGG CATCTAAGGC GCTGATGGCT
GTGGCTCTGA TTGCCGCATT CGCCACGTCG ATCATGTTCC GCGTGGTCGT CTACATGGTG
GGTTATCCTG TGCTCCTCGT GTATTAA
 
Protein sequence
MQTQWPLVIF TLFVCVTSGT LGMLSIFALK DKAEKIQMPA VILAAVSLVV GGVGSFTHLQ 
HWERIFNGFG HITSGITQEL IGCVVLAVLI VIWFVMIRGQ KTNKALAWVT LIASIAMVAA
TAHSYWMAGR PAWGVGLEFF YLGNACLLGP VVLWALTAVK ADNQCLADSI NFTFVGGIIA
LVTEVIFIAL AAGTKFTDVG HYLNPTLMTT APTHIDNVAS IALTGAGAPL FWLSLVCAAA
TAVCAFMAKK NPEASKALMA VALIAAFATS IMFRVVVYMV GYPVLLVY