| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_27290 |
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| Symbol | |
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| ID | 8396617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 3017445 |
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| End bp | 3019331 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644987471 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003145076 |
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| Protein GI | 257065404 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAGA CAAATTACAA GCCGATGCTC GTCATCCTTT ATCTGGCGGC GTTCATTGCG
GCGTTCAACG AGAACATCAT CAATGTGGCC ATGGTGGACA TCATGGCCGA ATTCTCCATC
AGTTACAGCG CAGCGCAATG GCTGGTCACA GGCTATATGA TCGTGACATC GATCATCGTA
ACGGTGATGT CGTTCCTTTC GCGACGGTTC ACGTTGCGTC GGCTGTTCTA TGTTGCTGGG
GCATGCTTTT TGGTGGGCGA GGCGGCAAGC TTTGTCATGC CGAATTTCCC GTTGCTGCTG
GCTGCGCGTC TGCTCCAGGC TGTAGGGTCA GGCGTGTTCA TCCCTCTCAT GATGGGTACG
GTGCTGGCGG TGGCTCCCCG CGAGAAAATG GGCACCTACC TGTCCATCGG CTCGGCGGCC
ATCACGCTGG GCCCCGCCTT TGCGCCTGTG GTCTCGGGCG TGGCGGCCAC CTTCATCGGA
TGGCGAGCCA TCCACGTGGT GCCGTTCACG GTTGTGGCGT TGCTCGCCGT TGCAGGTGCG
AAACTGCTGC GCAACATCGG CGAGCCCGAG TCCGTCAAGC TGGATGCGCC ATCGCTGGCG
TTGGCCAGCG TGGGTCTCAC GGTCTTCGTC TTCGGCCTTG GCGAAATCAC CACCCATCTG
CCACTGGCAC TTGTCTGCAT CGCCGTATCG GTCCTGGTCA TTGCAGCGTT CGTGCGCCGT
CAGTTCGTCA TTCCCAATCC CATGCTCACC ATGCGCCCCA TGACCGATCC CCGATTCTCG
GTGGCGTGCA TCCTGGTCAT CGTGGCCATG ATGACCACGT TCTCCATGAG CGTGTTGCTT
CCTCTGTACT TCGAAGGGAC TTTCGGCCAC ACGGCGCTGC TGGCTGGCCT ACTTATCCTG
CCGGCCATCG TGGTCAATGC GATAACAGCT GTTATCGGCG GGCGCATCAT GGACAAATCC
GGCCCTTGGC CCCTTATCCC CGTGGGGTTT TTGCTGGCCG CCGCAGGTCA GTGCGCCATC
GCGGCGTTCA GCGCATCGAT GTCGCTGGTT GTTGTGGTAG TCGCGTCGGT GGCGGTGTAT
GCGGGCGTCG GCCTCATGAT GTCGCCCTCC CAAACCGCCG GCCTGCGGAC GCTGCCCCGC
GAGGAGCACG GTGCGGGCGT GTCCATCATC AACACCTTCA ACATGGTGGC CGCTTCCATC
GGACCGTCGC TGTTCATCGG CATTCTGTCG TCGGGTGCGG CGAAGGCGTC GGCGGAAGGA
ACCTCCGCCA ACGTCGGCAA CGCGGCGGGT TTCTCCCAAG CTGTGCTGGT AGCGGCAGGT
ATCGCTGTGC TCGGCCTGGT CGTGGCCGTG GTGTATTCCT ATAAAGAGCG CGGTGCGGCA
CCTGCGGCTG TGCATGCGTC CGAAACTGAA ATCGCCTCGG GCGCGACGGT CCCGAGCTTG
GCCGACGTCA TGAAGCGAGA CGCCTACACG GTGCCCGCCA GCGCCACCGT AGCCGATGTG
GCTCGCATCC TAGTGGCCAA CAAGACCAGC GGCGTGCCCG TGGTGGGAAA GGCCGGCGCG
GTGCTCGGCT TCATTTCCGA CGGCGACATT ATGCGCGCCT TGTCGAAGTC CGAAACGCAA
GCCGTTGACC TGGGCTATTA CCTGGCTGCC ATGGCGGAGG ACGAGGCTTT CGGCGATCGC
GTGCACGACC TGCTGGGCCG CAACGTCATG GATTACGCCA CCGAGAACGT GGTGTGCGCA
TCCGCTGACG AGCCCATCGA CAGCGTGTGC GCCAAGCTCA ACGGCCGTCG CATTAAGAAG
ATGCCTGTCG TGGAGAACGG TCGCCTGGTT GGCACCGTCA GCCGAAGCGA CATCGTCCGC
TACCTGATGG AATCCTTCGT GGCCTAG
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| Protein sequence | MQKTNYKPML VILYLAAFIA AFNENIINVA MVDIMAEFSI SYSAAQWLVT GYMIVTSIIV
TVMSFLSRRF TLRRLFYVAG ACFLVGEAAS FVMPNFPLLL AARLLQAVGS GVFIPLMMGT
VLAVAPREKM GTYLSIGSAA ITLGPAFAPV VSGVAATFIG WRAIHVVPFT VVALLAVAGA
KLLRNIGEPE SVKLDAPSLA LASVGLTVFV FGLGEITTHL PLALVCIAVS VLVIAAFVRR
QFVIPNPMLT MRPMTDPRFS VACILVIVAM MTTFSMSVLL PLYFEGTFGH TALLAGLLIL
PAIVVNAITA VIGGRIMDKS GPWPLIPVGF LLAAAGQCAI AAFSASMSLV VVVVASVAVY
AGVGLMMSPS QTAGLRTLPR EEHGAGVSII NTFNMVAASI GPSLFIGILS SGAAKASAEG
TSANVGNAAG FSQAVLVAAG IAVLGLVVAV VYSYKERGAA PAAVHASETE IASGATVPSL
ADVMKRDAYT VPASATVADV ARILVANKTS GVPVVGKAGA VLGFISDGDI MRALSKSETQ
AVDLGYYLAA MAEDEAFGDR VHDLLGRNVM DYATENVVCA SADEPIDSVC AKLNGRRIKK
MPVVENGRLV GTVSRSDIVR YLMESFVA
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