Gene Shel_27270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_27270 
Symbol 
ID8396615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp3015137 
End bp3015991 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content63% 
IMG OID644987469 
Producthypothetical protein 
Protein accessionYP_003145074 
Protein GI257065402 
COG category[R] General function prediction only 
COG ID[COG3381] Uncharacterized component of anaerobic dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAA CCACCGCTGT TACGTTCGAC CCAGCCGACG CCTGGGGACT CGAGGCGCTG 
CTGATTTCGC GAGTGCGCCT GTACACGCTG TTCCACAAAC TGTTCGGCGG CAACACCACC
CCCGAGCTGA TTGACGAGCT GTTGGGCCAA GGCACGCAGG ACGCGATCGA GGAGGTCGCA
GGCGGTGCTG TCGAGATGCA GAACCTGCTT GGATTCCTGA ACGACCTGCG CAAACGCGAC
CGCTCTGAAC TCGCGGACAC AGCCAAGGAC GAGTACACGC GCCAGTTCGT CGGACCCGGC
ACGCTTCCCG CCCCTGCGAC CGAGTCGCCA TACCTGACCC GCGATGCCTC CACTGTACAG
GAGAACACGC TTCTCGTGCG CATGGAGTAC CGCATGTACG GCCTGCAGGC GAAGCGCTTC
CAGCGCGTGC CCGAAGACCA CGTGGCCATG ATGTGCTCCT TTATGGCATC CCGCGCCAAG
AAGGCCCTGC AACTTCTGCG CGCCGGGACC CTGCCCGAAC TGGGACAGGA GCTGTACGAC
GAGCGTGCGT TCGTCGTGAA CCACATGGCC AACTGGCTGC CCGAATTCGC GAAGCTCACT
CGCAACCACA CCAAGACCAC GGTGATGTTC CCGCAGCTCA TCGAGGCTTT GAGCGTGTTT
GTGAACGTAG ATGCAACCAT GCTTGCCGAA GGTGCCTACT GGGCCGAGCA GGTGGAGCTG
CCCGAGGCCG GCATGCCCGC CCTGCCCGAC GAGCTGGCCG AGTCGTTCGC CCAGGCAGAA
CAGGGCATCG GCGCCCTGGA GGCCATTCGA CTGGTGGGCC TTGAGGACGT CGAGCTTATC
GCAGTCGAGA ACTAG
 
Protein sequence
MSETTAVTFD PADAWGLEAL LISRVRLYTL FHKLFGGNTT PELIDELLGQ GTQDAIEEVA 
GGAVEMQNLL GFLNDLRKRD RSELADTAKD EYTRQFVGPG TLPAPATESP YLTRDASTVQ
ENTLLVRMEY RMYGLQAKRF QRVPEDHVAM MCSFMASRAK KALQLLRAGT LPELGQELYD
ERAFVVNHMA NWLPEFAKLT RNHTKTTVMF PQLIEALSVF VNVDATMLAE GAYWAEQVEL
PEAGMPALPD ELAESFAQAE QGIGALEAIR LVGLEDVELI AVEN