| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_26670 |
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| Symbol | |
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| ID | 8396555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2944540 |
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| End bp | 2946666 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644987409 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_003145015 |
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| Protein GI | 257065343 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000046682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.968488 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAGA CCAGTTTGTT CGACGCCGAC GAATCCGCGG CAACCGTCAG CGATGTGAAG
GCCCGCATCG ACGCGTTGCG TAAGGAAATC GAACACCACA CCTATCTGTA TTACGCCAAG
GACGCTCCTG AGATTTCGGA CGCGGCATTT GACTCGCTCA TGCGCGAGCT GCGCGAGCTG
GAACTGGCGA ATCCCCAGTA CATCGACCCT ACCAGCCCCA CGCAACGCGT CGGCGGCTAC
GTGGGCGAGC AGTTCAGCCC CGTGCGCCAC GCCGTGCGCA TGTATTCGCT GGACAACGCC
ATGGGTCTCG ATGAGCTGGA CGAATGGTTG GCCCGCACGC TGGAGGCCAT CGGGCACCCG
GTGCAGTTTT GCTGCGAGCT GAAGATTGAC GGCTCGTCTA TCGCGCTGAC CTACGAGGCG
GGCGTGTTGA CGAAGGCGGC TACCCGCGGC GACGGCACCA CGGGCGAAGA CGTGACGGTG
AACATGCGAA CCGTGCGCGA CATCCCGCTG CGCCTGCGGG ACGACGGCAT GGCCGGGCTG
CGGGATTCGG ACGCCAGCAT CGAGGTGCGC GGCGAAGTGT ACATGCCCAA GAGCAGCTTC
GAGAAACTGA ACGCGGCCGC CGAGGCCACC GGCAAGCAGG GCTTCGCCAA CCCGCGCAAC
GCGGCGGCGG GCTCGCTGCG CCAGAAGGAT CCGAAGATCA CTCAGAACCG CGATTTGGCA
ACGTTCCTGT ACGCCATTGC CGACGACGCC CCGATTCGTG CGGAATCCCA GAATGACCTG
CTGGAATGGT TGCGCGACTG CGGCTTTCAC GTCAATCCGG ACGTCAAGCT GTGCGACACG
CCGCAGGAAG TGCACGACTT CTGCGAGCAA GTGGCCGAAA AGCGAGACAG CCTGCCGTAC
GGCATCGACG GCGTGGTGGT GAAGGTGAAC GATTTCGCCA CCCAGCGGGA TATGGGCTTT
ACGGCCCGTG CGCCGCGCTG GGCCATCGCG TACAAGTTCC CGCCGGAGGA GAAGACCACC
GTCATGCACG ACATCACCGT GCAGGTGGGT CGCACCGGCG CCTGCACGCC CGTGGCGGAG
CTCGACCCTG TGCTGGTGGA TGGTTCCACT GTGGCCCGCG CCACGCTGCA CAATCTGGAC
GAGGTGCGCC GCAAGGACGT GCGCATCGGC GACACGGTTA TCGTGCGCAA GGCCGGCGAC
GTGATTCCCG AGATTCTGGG GCCGGTGCTT TCGCTGCGCC CCGAAGGCGC GAAACCTTGG
GAGATGCCCG CCACCTGCCC GAGCTGCGGT AGCCCCCTGG TTCGCGAAGA GGGCGAGGCC
GCCTTCCGCT GCGTGTCCAT CGACTGCCCG GCGCAAGCCA TGGAGCGCCT GATCCACTGG
GCCAGCCGCG GCGCCATGGA CATCGACGGC ATGGGTGACG AAATTGTCGC GCGCCTGGTG
GAGTCCGGGC GCGTGCTGGA CGTGGCCGAC TACTACAACC TGACGGAATA CGACCTGGCC
ACGCTGGAAA CGGGCCGCAT CAACAAGGAG GGCGAGCCCA TCCATCTGGG CGGCACCATC
GCGGCCAAGC TTATGGCGTC GCTGGAGGCG TCGAAGTCCC GCACCTTCGC CCGCGTGCTG
TTCGGTTTGG GCATTCGCCA TGTGGGCAAG ACCACCGGCG AGGCCATTGC GGCGGCCTAC
CCAAGCATGG AGAAGTTGAT GAACGCCACC GAGGAGGGCT TGGCCCAGGT GGACGGCATC
GGCGCGGTCA TCGCGAAGAG CATCGTGACG TTTTTGGCCA CCGAGGACAA CCGCGAGGTC
ATCCATAGGC TCGAGCGGGC GGGCGTGACC ATGGCCGACG AGGTGAAAGA GAGCGACATC
CCCCAGACGC TTGCCGGCAT CACGTTCGTG CTGACCGGAT CGCTGACGGA AAGCGGCATG
ACCCGCACCG AGGCAGGCGA CCGCCTGAAG GCGATGGGTG CGAAGGTGTC CGGCAGCGTG
TCGAAGAAGA CCGGCTACGT GGTGGCCGGC GAGGCCGCAG GCAGCAAATA CGACAAAGCC
GTGCAGCTGG GCGTGCCCGT GCTGACAGAG GCCGAGTTCC TACGCCTGCT GGAGGCGGGG
TCGCTGGAGG CGGCGGGGTT GGCGTAG
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| Protein sequence | MEQTSLFDAD ESAATVSDVK ARIDALRKEI EHHTYLYYAK DAPEISDAAF DSLMRELREL
ELANPQYIDP TSPTQRVGGY VGEQFSPVRH AVRMYSLDNA MGLDELDEWL ARTLEAIGHP
VQFCCELKID GSSIALTYEA GVLTKAATRG DGTTGEDVTV NMRTVRDIPL RLRDDGMAGL
RDSDASIEVR GEVYMPKSSF EKLNAAAEAT GKQGFANPRN AAAGSLRQKD PKITQNRDLA
TFLYAIADDA PIRAESQNDL LEWLRDCGFH VNPDVKLCDT PQEVHDFCEQ VAEKRDSLPY
GIDGVVVKVN DFATQRDMGF TARAPRWAIA YKFPPEEKTT VMHDITVQVG RTGACTPVAE
LDPVLVDGST VARATLHNLD EVRRKDVRIG DTVIVRKAGD VIPEILGPVL SLRPEGAKPW
EMPATCPSCG SPLVREEGEA AFRCVSIDCP AQAMERLIHW ASRGAMDIDG MGDEIVARLV
ESGRVLDVAD YYNLTEYDLA TLETGRINKE GEPIHLGGTI AAKLMASLEA SKSRTFARVL
FGLGIRHVGK TTGEAIAAAY PSMEKLMNAT EEGLAQVDGI GAVIAKSIVT FLATEDNREV
IHRLERAGVT MADEVKESDI PQTLAGITFV LTGSLTESGM TRTEAGDRLK AMGAKVSGSV
SKKTGYVVAG EAAGSKYDKA VQLGVPVLTE AEFLRLLEAG SLEAAGLA
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