| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_26510 |
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| Symbol | |
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| ID | 8396539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 2925639 |
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| End bp | 2926970 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644987393 |
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| Product | site-specific recombinase XerD |
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| Protein accession | YP_003145002 |
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| Protein GI | 257065330 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.938683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATACG GAGACGCGGA ACCCCGCGAA AAGCTAGACG CGAACGGCAA AAGCTACAGC
CCGAAACGAT GGGAGATAGT CCTTTGCCTC GGAGCAGACC CCGTGACCGG GAAGAGGCAG
CGCATAAAGC GTGTTGTCAG GGGCACCAAG TCGGACGCCC GCAAGGCCAG GGACGCCATA
AGGCGCGAAT ACGAAAGCGG CCTCAGCTTC GAGAGCGAAA GCATGGGGTT CTCAGAGTTC
GCCCGCGAAT GGTGCAAGGC AAGGAAAACG ACCGGGGCAC TCAGGGAGAA AACCCTTGCA
CGGGATGAGC AGACGGTAAG GCTGCTCAGC GGCTACCTCG GGAACGTGAA GCTAAAGGAC
ATTACCCCGC AGATGGTGGA AAGGCTCTAC GACGCCATAC GGGAGGACAA GCGCAAGACG
GGAAAGCCCT ACTCCGAAAC GACAATGAAC CGGATGCACG GAACCATGAG GCAGATCATG
GACAAGGCGG AGCGTTACGA CCTGATACTC AGGAACCCGT GCAAGCGGGT AGACCCTCCC
AAGATAGAGG ATTCGGATAG AAAGAGCCTC GGGCGGGCCG AATGCGTGAA GCTGCTCAGG
GCGATAGACT CCGAGGAATC CGAAATGGAG CAGGGGTATA GGGCCAAGGA GCAGCGGCGC
GAGGAATGGA ACGCAGCCAG GAACGCGAAG AAAGGCCCTC GGGGCCGTCT CTACGGCCTG
GGCAACCTGG GACGCCTCGA AGCCGTCAGA ATCGGCCTCG CAACGGGAAT GAGGCTCGGG
GAAGTCCACG GGCTTAAATG GTCTGATGTG GTGTTGGCGG AACGAGGCGG CGAATGGGGC
GGAGTAATCA GCGTGAGCAA GTCCCTCTCA TTCAGCGGGA AACTGCAAAG CCCGAAAACC
AAAGCGGGGA ACCGAAGCAT CAACATCGAC GCGCATACTG CGGAAAGGCT CTCATGGTGG
AAACGCACCC AGGCCGAAAT GCTGGGCAAG ATAGGCAGGG AGCAAGGGCC TGATACGTTC
ATTTGCTGCA ACGACGAGGG CGGCTCGGGG AGCATCCCCA ACTTTGAAAG ATGGTGGAGG
GAGTTCCGAA CCCGTGCGGG TCTCCCGGGC TTGCGATACC ACGAACTCAG GCACACCCAG
GCAACCCAGC TTCTAGCGGC GGGCGTCGAT GTGAAAACGG TGCAGAACCG GATGGGCCAC
GCGAACGCCT CAATCACGCT TGACTGGTAC GCGCACGCGC AGCCCGAGAA CGACGTCAAA
GCGGCTGCTC TCATGGGAGC GATCATGGAG GAAGAGCCGC CCTCGAACGT CGTTCAAATC
CGCACGGCAT AG
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| Protein sequence | MGYGDAEPRE KLDANGKSYS PKRWEIVLCL GADPVTGKRQ RIKRVVRGTK SDARKARDAI
RREYESGLSF ESESMGFSEF AREWCKARKT TGALREKTLA RDEQTVRLLS GYLGNVKLKD
ITPQMVERLY DAIREDKRKT GKPYSETTMN RMHGTMRQIM DKAERYDLIL RNPCKRVDPP
KIEDSDRKSL GRAECVKLLR AIDSEESEME QGYRAKEQRR EEWNAARNAK KGPRGRLYGL
GNLGRLEAVR IGLATGMRLG EVHGLKWSDV VLAERGGEWG GVISVSKSLS FSGKLQSPKT
KAGNRSINID AHTAERLSWW KRTQAEMLGK IGREQGPDTF ICCNDEGGSG SIPNFERWWR
EFRTRAGLPG LRYHELRHTQ ATQLLAAGVD VKTVQNRMGH ANASITLDWY AHAQPENDVK
AAALMGAIME EEPPSNVVQI RTA
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