| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_26330 |
|---|
| Symbol | |
|---|
| ID | 8396521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 2907024 |
|---|
| End bp | 2908346 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644987375 |
|---|
| Product | homoserine dehydrogenase |
|---|
| Protein accession | YP_003144984 |
|---|
| Protein GI | 257065312 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0460] Homoserine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACCA TCAATATCGG CCTCGTCGGA CTCGGCACGG TTGGCGGCGG CGTCGCTCGC
CTCATCATGA ATCACCACGA CGATTACGTG AAGAACTACG GCATCGACCT GCACTTGAAG
AAGTGCTGCT CGCTGTACCA GTCCGACGCC GATCGCCTGG GCCTTTCCGC CGACCAGTTC
ACCACCGATT GGCATGACGT CGTGTCCGAT CCCGACATCG ATATCGTCAT CGAACTCATC
GGCGGCACCC ACCCCGCCAT GGACATCTTC GAGGAATCCT TCAAGAGCGG CAAGCATGTC
GTGTCCGCCA ACAAGGCGCT GCTGGGCCGT AACACCGAGC ACCTGGCCCG CCTGGCTGCC
GAAAACGGCG TCTCCTTCCG CTGCGAAGCC GCAGCCGCCG GCGGCATCCC CGTGGTGCAC
GCCCTGGAGC ACGAGCTCAA CGGCAACGAG ATCCTCACCA TCGCTGGCAT TATGAACGGC
ACCACCAACT ACATCCTGTC CCGCATGAAG CATGAGGGTT CCGACTTCGC CGAGGTGCTG
GCCGACGCCC AGGCCCTGGG CTACGCCGAA GCCGACCCCT CCGCCGACGT GGACGGCTTC
GACGCCGCAT CCAAGATCGC CATCCTGGGC TCCATGGGCT TCCGCACCCG CATCACCACC
GACGACGTGT ACATGCAGGG CATTCGCGAC ATCTCCGCTG CCGACATCGA GGTCGCCGAG
GAGCTGGGCT GCACCATCAA GCTGCTGGCC ATCGCCCGCA AGACCGACAC CGGCGTGGAC
GTGCGCGTGC ACCCCACCAT GATTCCCAAC GGTCACCCGC TGGCCAGCGT CGACGGCGCC
ATGAACGCCG TGTACGTCGT GGGCGACGCC GTGGGCGAAA CCATGTTCTA CGGCGCCGGC
GCAGGATCCT TCCCCACCGC CTCTGCAGTT GTGGGCGACG TCTTCGCTCT GGCCGAGCCC
ATCTCCCAGG GTCAGAAGCC TCTGCCCGAG GCAGAGCCCT TCAGCGTGAA CCGTCCAATC
CGCACCATCG ATAACCTGCA TACCCGCTAT TACATCCGTC TGACCGTGGA AGACCAGCTG
GGCACCCTGG CCGCCAGCAC CCGCATCCTG ACGGACAACA ACATTTCCAT CAGCAACATC
CGCCAGCTGG AAGGCACCGG CGACGGCACC TGCACCCTCG TGTTCGTCAC CCACAGCGCC
CTTGAGGCCG ACCTGAAGAA GGCCGTCGAA GCCTTGGCCG CAGACGATTC CATTCGCGAG
GTGGCATCGG TCATCCGCGT CGAGGACATC GACAAGTGGA CCGAGGGCGT GTTCGCCAAC
TAA
|
|---|
| Protein sequence | MRTINIGLVG LGTVGGGVAR LIMNHHDDYV KNYGIDLHLK KCCSLYQSDA DRLGLSADQF
TTDWHDVVSD PDIDIVIELI GGTHPAMDIF EESFKSGKHV VSANKALLGR NTEHLARLAA
ENGVSFRCEA AAAGGIPVVH ALEHELNGNE ILTIAGIMNG TTNYILSRMK HEGSDFAEVL
ADAQALGYAE ADPSADVDGF DAASKIAILG SMGFRTRITT DDVYMQGIRD ISAADIEVAE
ELGCTIKLLA IARKTDTGVD VRVHPTMIPN GHPLASVDGA MNAVYVVGDA VGETMFYGAG
AGSFPTASAV VGDVFALAEP ISQGQKPLPE AEPFSVNRPI RTIDNLHTRY YIRLTVEDQL
GTLAASTRIL TDNNISISNI RQLEGTGDGT CTLVFVTHSA LEADLKKAVE ALAADDSIRE
VASVIRVEDI DKWTEGVFAN
|
|---|
| |