Gene Shel_26230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_26230 
Symbol 
ID8396511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2897323 
End bp2897958 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content61% 
IMG OID644987365 
ProductZn-finger containing NTP pyrophosphohydrolase 
Protein accessionYP_003144975 
Protein GI257065303 
COG category[L] Replication, recombination and repair 
COG ID[COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAAT CCAAGGCGCG CCCCGAGTTT TTGGGAATGG ACCAAGTCAG CGCCGGCTGG 
CTCAACAAAT ACGTGATGCA TTACCGCATG CCCGACGGCA GCGTGCATGA CTACGAGTCG
GTGTCCCGTA AGAAGGCGGA CGTGTACGGG GCGAACCTTG TCGCCGAAAC GCCCGACAAG
CCCAAAAGCG ACGCCGTGTG CATCGTCGGC ATGACCGCCG AGGGCGCCTT CCTTATGACC
AGGGAATTCC GCTTCCCCAT GAACCGCGAC TGCGTGCAGT TCCCGGCGGG CCTGCTGGAA
CCGGGCGAAG ACATCGTGGA GTGCGCCTCC CGCGAGCTGC GCGAGGAGAC CGGCTACGAC
ATCAGCCGCA ACGCCGACGG CACGCCCGTC ATGCTGAGGT ATTTCGAGCA GCCGGCCTAT
TCGTCCTTAG GCATGGGCGA CGAGAGCATC GCCATGGTGT TCACGCAGGT GGAGAAGGTG
GGAGAAGCGT CGCCGGAGCC CACCGAGTTT ATCGATGTGT TCGAACTGCC GCGTGAAGAC
GTGGCCCGTT TTTTGAAAGA GAACCGCGAC CCCATTTCTA TCCGCGTGCA GCTGGTGCTT
GGCATGGTCG TGTTCAACCC GTTCACAAAG GAGTAA
 
Protein sequence
MPESKARPEF LGMDQVSAGW LNKYVMHYRM PDGSVHDYES VSRKKADVYG ANLVAETPDK 
PKSDAVCIVG MTAEGAFLMT REFRFPMNRD CVQFPAGLLE PGEDIVECAS RELREETGYD
ISRNADGTPV MLRYFEQPAY SSLGMGDESI AMVFTQVEKV GEASPEPTEF IDVFELPRED
VARFLKENRD PISIRVQLVL GMVVFNPFTK E