| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_26070 |
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| Symbol | |
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| ID | 8396495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2875432 |
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| End bp | 2876544 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644987350 |
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| Product | putative virion core protein (lumpy skin disease virus) |
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| Protein accession | YP_003144961 |
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| Protein GI | 257065289 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4260] Putative virion core protein (lumpy skin disease virus) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGTAA TTAGGGCATT TACCGGTGCT ATTGGCGGTG CGTTTGCCGA CCAGTGGAAA
GACATCATTA CTGCGGGTGC ATTTGACGAG CACGTCGTGG TTTCTCCCGG CATACTAAGG
TCCACTAGCA ATGGCCGTGG CACTAACATG TATGGATCAG ACGGCGTCAT AAGCAATGGT
TCCAAGATAT ACGTCCCCGA AAATACGGCC TGTTTCATTT TCAGCCAATC GGGAATAGAG
GAAATCATCA CGGTACCTGG CGGGTATGAG TACCGGAATG GGCAGGAAAG CGTTTTTAAT
GGTTCAAGCT TCACAAGCGC TATCTTTAGT CAGGCTAAGG AAAGACTCGG TTATGGCGGC
ATGTCGGCCG ACTACAAGCA AATTGCATTT GTGAACCTCA GGGAAATCAG GGACATAAAG
TTCGGCACAA AGGGAGCACA GGTATATAAC GACTACTTTT ACGGTACTGA CCTAGAGATA
TTTGCCTACG GTTCTTTCAC TGTGAAGGTC ACCAATCCTG TTACGTTCAT TTGCAACTTC
GTTCCCGCTA ACGTCACTTA TTACACCTTC GACGACCAAA AGGTGAGATC ACAGATTCTG
GCCGAATTCT TGCAGTCATT TACCGTTGCA CTGAACTCGC TATCTAGCAC TTACAGGATT
TCGCAACTGC CCGCGCAGGC CAACGCTATT GCCAATACGG TCGCCAACGA CAACGATAAT
GCTGGTACCT GGGAGGAGCG GTTCGGTTTC AAACTGACCA AGGTTGCTAT TGAAAACATC
GAGTTTACCG AGCAATCGAG AGAGCTTGTC AGACAATACT CGGAGAACAG AATGCGCGTG
AAGGCGTACG ACGATGTTTC TCAGCGTGCG TCCAACATAG CCGCACAGCA ACAGATTGCT
GAGGGAATCC GAGATAACGG TCTTGGCGAT GCGGGTGGCA TGATCTTTGG CATGAACATG
GCTCAAGGTC TGGGATCCGT CGCTGAGCAG AGGCCCGCCA TGTCATTCGA TGAACAGATT
GAACAGCTTA AGAAGTTGAA AGAGCTTGTC GACGCTGGCA TTCTTACGCA AGAAGAGTTC
GACGTCAAAA AGAGGGAGAT CATGGGTCTC TAG
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| Protein sequence | MGVIRAFTGA IGGAFADQWK DIITAGAFDE HVVVSPGILR STSNGRGTNM YGSDGVISNG
SKIYVPENTA CFIFSQSGIE EIITVPGGYE YRNGQESVFN GSSFTSAIFS QAKERLGYGG
MSADYKQIAF VNLREIRDIK FGTKGAQVYN DYFYGTDLEI FAYGSFTVKV TNPVTFICNF
VPANVTYYTF DDQKVRSQIL AEFLQSFTVA LNSLSSTYRI SQLPAQANAI ANTVANDNDN
AGTWEERFGF KLTKVAIENI EFTEQSRELV RQYSENRMRV KAYDDVSQRA SNIAAQQQIA
EGIRDNGLGD AGGMIFGMNM AQGLGSVAEQ RPAMSFDEQI EQLKKLKELV DAGILTQEEF
DVKKREIMGL
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