| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_26000 |
|---|
| Symbol | |
|---|
| ID | 8396488 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 2869451 |
|---|
| End bp | 2870167 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644987343 |
|---|
| Product | methyltransferase family protein |
|---|
| Protein accession | YP_003144954 |
|---|
| Protein GI | 257065282 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.709273 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTCC CGAAGGCTAA CTCCTTCTCA ACATCCATCA TGCGCGAGCG CAGCATGGGG
CCCAACCCGC TCAAGCTCTG CGAGGAGCTG CTGGAATACG CAGACATTCA CGCAGGCTCC
GTCGTGCTCG ACCTCGGCAG CGGCGCCGGG CTCACGAGCG CCCTCATGGC GCGCGAGTTC
GGCCTCACCG TGTACGCAGC CGACCTCTGG AGCGACCCGT CCGACAACAT GCGCTTCTTC
GAGGCGTGCG GCCTCACCAA CCGGCAGATC ATCCCGCTCA AGGCTGACGC GACCGCGCTT
CCCTTTGCGC ACGAGTTCTT CGACGCGGTG GTGAGCGTCG ACTCGTACAA CTACTTCGGC
CGCGACCCCC GCTACCTCGG CGGGCACCTG CTGCCGCTCG TCAAGCGTGG CGGCGAGCTG
CTCTTTGCCA TACCCGGCAT GGTGCGCGAC TGCCACGACG ACCTGCCCGC GTGCCTGCTC
GCGTCCTGGA CGCCCGAGCA GCTCGACTAC ATGCACGACA TGTCTTGGTG GCGCGTCAAC
ATCGAGCAGA CCGAGGATGT CGAGGTCCTC GACATGCGCG AGATGGCCTG CACGCGCGAG
GCGTGGGCCG ACTGGATCGG GTGCGACAAC GAGTACGCTG CGGGCGACCG CGCCGCCGTC
GAGGCCGGTG CGCTCGACCA TCTCAACACC ATCGCCGTGA GGCTCAGGCG CAGGTAG
|
|---|
| Protein sequence | MNFPKANSFS TSIMRERSMG PNPLKLCEEL LEYADIHAGS VVLDLGSGAG LTSALMAREF
GLTVYAADLW SDPSDNMRFF EACGLTNRQI IPLKADATAL PFAHEFFDAV VSVDSYNYFG
RDPRYLGGHL LPLVKRGGEL LFAIPGMVRD CHDDLPACLL ASWTPEQLDY MHDMSWWRVN
IEQTEDVEVL DMREMACTRE AWADWIGCDN EYAAGDRAAV EAGALDHLNT IAVRLRRR
|
|---|
| |