Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_25860 |
Symbol | |
ID | 8396474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2858283 |
End bp | 2859314 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644987329 |
Product | uroporphyrinogen-III decarboxylase |
Protein accession | YP_003144940 |
Protein GI | 257065268 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01463] methyltransferase, MtaA/CmuA family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTCGCAG GAGAGCCCCT CGACCGTCTG CCTATGATGC CCTTCGTCAT TTCCTACTCT CCCCGTGTTT TGAACCAGAC TCAACGCTGG TATCGTGAGA GCGCCGAAAA CCGTGCGGCG TGTCAAATCG CCGCTTACGA AAAGTGGGGG CACGACACGA TGGTTATTGA ATACAGCCTC CACGGGGTGT CCCATGCGCT CGGCAGCACC TGGACAGACC CCGAAAACGC ACAGACCGCG ATCGACAAGC ACCGCCTTGA CGACCTTGAT GACGTGGACG GGATCGATTG GGATATCGAT GCGGTTCGCA AGGAGAACGA TCCGTGGATG CAGATGAACG TCGACGCCGC GCAAATCTGT CTTGATAGGT ACGGTGACGA AGTGGGCGTG AGCGTCACTC TGCCTGGAGC AATGACCGCG GCTTCGGGTC TGTATCCCGT CGCTCAGCTG CTTCGAGCGA AGAGAAAGCA GCCCGAACAG CTTCATAAGC TGCTCAAAAT CTGCAATGAG GCCATAAAAC TCGTATGCGA GGAGTTCATC AAACTGGGCG CCACCCCGTT CCTGTGCGAC CCGGTCGCTT CCGGCACCAT CATCAACGAG AAAGAATTCC GCGAGTTCTC GCTGCCCTAC ACTCAGGAGG TTTTCAAGTT CTGCCATGAC AACGGGGGAG GCTGCGGTTA TCACATCTGC GGTGATACGA CGAAGCTCAC CCAAGCCATG AGTGAAAGCG GCTGCGACAT GCTCAGCGTG GATGACGCGG TCGACCTTTC GTACGTGAAG GAGGTCTGCG GCGATAAGCT GCCGCTCATC GGCAACGTAA GCCCAAACGC CACAATGATG CTCGGCACTC CCGAGGATGT TCGACGCAAC ATCAAGGAGA ACCTCAAAAA GGCATACGAC TCCCCTTGCG GATACATCGT TGCCACCGGT TGCGACATTC CGCTGCCCGC CCCGATCGAG AATGTCGATG CTTTCATGGA CGGCGTTCGT GAGCTCGCCC GATATCCGTT CGACCCCGAA AAGTGGGCAT AG
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Protein sequence | MFAGEPLDRL PMMPFVISYS PRVLNQTQRW YRESAENRAA CQIAAYEKWG HDTMVIEYSL HGVSHALGST WTDPENAQTA IDKHRLDDLD DVDGIDWDID AVRKENDPWM QMNVDAAQIC LDRYGDEVGV SVTLPGAMTA ASGLYPVAQL LRAKRKQPEQ LHKLLKICNE AIKLVCEEFI KLGATPFLCD PVASGTIINE KEFREFSLPY TQEVFKFCHD NGGGCGYHIC GDTTKLTQAM SESGCDMLSV DDAVDLSYVK EVCGDKLPLI GNVSPNATMM LGTPEDVRRN IKENLKKAYD SPCGYIVATG CDIPLPAPIE NVDAFMDGVR ELARYPFDPE KWA
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