Gene Shel_25830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25830 
Symbol 
ID8396471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2854123 
End bp2854917 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content55% 
IMG OID644987326 
ProductABC-type metal ion transport system, ATPase component 
Protein accessionYP_003144937 
Protein GI257065265 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1135] ABC-type metal ion transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGAGC CGGCAATTCA TATCGAGGGT TTGCGCAAAG TATTCACTGA CAGGAAAAAC 
CAAAGCGTCG AGGTGCTGAA GGGAATCGAC CTTGACATCG AAAAGGGCGA CATCTACGGC
ATCATCGGTT TGAGCGGTGC TGGCAAATCG ACGTTCGTGC GTTGCCTCAA TCGCCTTGAG
GAGATAACAT CGGGCACTAT TGCCATCGAC GGTGTGGACA TCGCTTCTTT GTCGAAGCGC
GAGCTGGCTG CGAAGCGCCA GGAAATCGGC ATGATTTTTC AGCATTTCAA CCTGTTCGAC
TCGAAGACGG TGCGCGACAA CGTGGCGTAT CCCCTCAAAA TTGCCGGCGT CGACAAACAG
GTGCAGCAAG AGAAAGTGAG CCGTTTGCTC GAGGAAGTCG GACTGGCCGA CAAGGCGGAT
TACTACCCGA GCCAGCTGTC GGGTGGACAG AAACAGCGCG TCGGAATCGC GCGAGCCATG
GCTAACGATC CTAAGGTGCT GCTCTGCGAC GAGGCAACGA GCGCTCTTGA CCCGCTGACC
ACGCTCTCCG TTCTGGACCT GATCAAATTC ATGAACAAGG AACATGGCGT AACGGTGGTT
ATGATCTCGC ACGAAATCAA TGTGATGCGC TATGCCTGCA ATCACGTGGC CGTCATCGAG
AACGGCCTTA TCGTCGAAAA AGGTCCGGCG CACGAGGTTC TGGACGCACC CTGCAGCGAA
ACCGGCCAGA TGTTCTTGAG CGTTGAGAAA CAGCTCAGCC AAACGTGGGC GAGCGAGAAA
CCGAAGGTGA GGTAG
 
Protein sequence
MGEPAIHIEG LRKVFTDRKN QSVEVLKGID LDIEKGDIYG IIGLSGAGKS TFVRCLNRLE 
EITSGTIAID GVDIASLSKR ELAAKRQEIG MIFQHFNLFD SKTVRDNVAY PLKIAGVDKQ
VQQEKVSRLL EEVGLADKAD YYPSQLSGGQ KQRVGIARAM ANDPKVLLCD EATSALDPLT
TLSVLDLIKF MNKEHGVTVV MISHEINVMR YACNHVAVIE NGLIVEKGPA HEVLDAPCSE
TGQMFLSVEK QLSQTWASEK PKVR